Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2535 ATGAGAAAAAGAGACGGTGGAGACTTGGCCCAAGTCACCGTGACAATCCGGATCCCACCCTTACACAGCCTTGTGATTTCCCGCCACAACAGAGCGAATCTCCTGCCTGCGCTAATATCAGAAGAAGAGAGAAGTTCGACGACGAAGCCGGTAGCCACCGTGTTTAATCGAATGGCTCCTTCTTCTCCGATCAATACTGCTTCGCAACCGCCTTCAACCGCAGAGAATGATATTCAGCCATTCTTTGTACTACATAAAGCTTCACATCGACGGAAAGATAGAACGCCAGTCAGACAGGGAAAATATCGCAAGAGAAATGAGGTTTCTCCTGAATTGCCACAAAGTTCAAAGAAAGGAGAAGAAAGTACAAATGAAGAATGTGATCGCCGTTTCTGTCAGCAAATGCAGATTGAAGCTTTTGATATTGTTTGGACAAAAATCGAATCTACCATTAAGGACGTCTTGAGAGACCTTAATGCTAGTGTTTTCAATAATATACAACAATGGGTTCTGGAGGGCTACAATACTACTAGATTAGTTGGAGAACCTAGCATTGCTGAAGCAACTAGGTCTTTTCCTGTTCTAAATAATACTACTCCTGGGAAGTTGTACACTGCATTAGTTATTACAAGAAACATAGAGTTTGTTGATGATATAGTGACATTTGAAGAGCTTGGCATTTTCTTGAAGTCCCATGGATGTCATGTGGCTATGCTTTCATCAATGGAGTTTTCACTAAAAAATGGAATTGCTGGTTGCTTGAAAGCTTTATTGCGAGAGTTTCTAGGAGGTTCTTTCGACCAGTCAGCCGATCTATCAACCTTAGCATCATGGTATAGAGAACAAGACAACTACAATAAACCATTAGTACTGATTGTTAATGATTTGGAAAGGTGTTGCGGATCAGTCTTAACTGATTTTATCCTGATGTTGAGTGAATGGGTTGTCAAGGTGCCAATCATCTTAATATTTGGAGTTGCAACGACAGTGGATGCCCCAAGAAACATTTTTCCATCTCATGCTCTTGAGTGTTTGTGCCCTTCTACGTTTATGCTTGTAACACCAGCTGAGAGAATGGATGCAATTGTTGTGGAAGTTCTTGTAAAACATTGCACCACTTTTAATATCGGTCATAAAGTGGCACAGTTATTGAGAAACTACTTCATCAACCAGGATGGGACAGTAACATCTTTTATAAGAGCTTTGAAGGTAGCATGCTTATTACACTTCTCTATGGAACCTTTGAGTCTCATACATGGGAGAATTCTTGTTGAAGATCAGGATGCAAAATCTGGATTATCACCGGAGACTATGTCGAAATACATGGATGAACTTCCATCATATGCAAGGAATAAAATGGTTGATCAGACTAATAAGAGCATGGCTGAGGGTTTGTCAGAATTGGTGACAGTGCAGAAACTATGGAGCACTGTGGTTCTATGCCTATATGAGGCTGGAAAATATAGCAGAGTGCGGCTGCTGGATTTGTTTTGTGAAGCACTCAATCAAGTTTTGTACCCATCAAGGGATTCTGTTTGTCATACGAGGGATGAAAAAGACCATGGATTGCCCTCAACAAATGATCCCTGTCAGCAATATTCCATCTTGCAAAGTGGAGGTTTTATTTGCCAGATAGCACGCAGAGTGAGGGATCTCCCTCCAGGAAAGCTAGATCAATTGATTGATAGTTGGGAAAAAATTACTGCAGATATTTCAGAGATTCATGAGAAACTGAAAATCTTGCAATCGTCGGTAAGTTTTAAAGATGGAAAGAGTTCACGCAGGAGCTCCAAGGACATTTCCAAGAGATCTGTGTCCAAAATCATTGACAAGGAATCAAGATTGTCAAACTTGCAAGCTATCGCATTTCTTGACGATTTAGTTAGAAATTATTTGAAGCCCATTGAAGGAATGCCTTTCCATGAAATTTTCTGCTTCAACAATGTTGAGAAGCTTCAATTGGTTTTGATCGGAGATCCAAGGAGAAGGATTCAAGTCGATCTGTTGGATTTCCATGATATTTTAGGATGTAGTTGCTGCAACAAGAGTGGCAAGGCCCTATTGCCATCCATGCATGATTCCTCAATTATGTACTCACTAGCTCAAGAGCATGGAGATCTTATCAATCTTCATGATTGGTTCCAGTCATTTAGAACAATTGTTCTTCAAAATACAAATAAACGGAAACAAAAATCGAAGAACACCCCCTCATCAAAGAAGAGAAAAGAAATGAATGAATCTGGAGACCAAAATGAAGCCTCAATTCAAGCACGATTTTGCAGGGGAGTTACAGAGCTGCAAATCACTGGGCTAGTTCGAATGCCTAGCAAGAGACGTCCAGATTTTGTACAGAGAATAGCATTTGGCATTTGA 2373 0.405 MRKRDGGDLAQVTVTIRIPPLHSLVISRHNRANLLPALISEEERSSTTKPVATVFNRMAPSSPINTASQPPSTAENDIQPFFVLHKASHRRKDRTPVRQGKYRKRNEVSPELPQSSKKGEESTNEECDRRFCQQMQIEAFDIVWTKIESTIKDVLRDLNASVFNNIQQWVLEGYNTTRLVGEPSIAEATRSFPVLNNTTPGKLYTALVITRNIEFVDDIVTFEELGIFLKSHGCHVAMLSSMEFSLKNGIAGCLKALLREFLGGSFDQSADLSTLASWYREQDNYNKPLVLIVNDLERCCGSVLTDFILMLSEWVVKVPIILIFGVATTVDAPRNIFPSHALECLCPSTFMLVTPAERMDAIVVEVLVKHCTTFNIGHKVAQLLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSLIHGRILVEDQDAKSGLSPETMSKYMDELPSYARNKMVDQTNKSMAEGLSELVTVQKLWSTVVLCLYEAGKYSRVRLLDLFCEALNQVLYPSRDSVCHTRDEKDHGLPSTNDPCQQYSILQSGGFICQIARRVRDLPPGKLDQLIDSWEKITADISEIHEKLKILQSSVSFKDGKSSRRSSKDISKRSVSKIIDKESRLSNLQAIAFLDDLVRNYLKPIEGMPFHEIFCFNNVEKLQLVLIGDPRRRIQVDLLDFHDILGCSCCNKSGKALLPSMHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQNTNKRKQKSKNTPSSKKRKEMNESGDQNEASIQARFCRGVTELQITGLVRMPSKRRPDFVQRIAFGI* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2535 790 MobiDBLite consensus disorder prediction 725 752 - -
Tpr1g2535 790 MobiDBLite consensus disorder prediction 85 99 - -
Tpr1g2535 790 MobiDBLite consensus disorder prediction 83 125 - -
Tpr1g2535 790 Pfam Origin recognition complex winged helix C-terminal 661 788 IPR040855 -
Tpr1g2535 790 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 119 417 IPR045667 -
Tpr1g2535 790 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 67 789 IPR020795 GO:0003677|GO:0005664|GO:0006260
Tpr1g2535 790 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 67 789 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2535 58 759 Core DNA Replication Machinery Family AT5G16690 45.781 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2535 K02605 - gmx:100780646 1098.19