Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g2522 | ATGTTTATGTTTTGTTTTAATCCCTTCACAACAACCATGTTTATGTTTTTATTTTTGTTTACCTTTATCAAAACTCTAAAAGTTACAACAAGCACTGTAATTAGTCCAACTACATTCTCCTTTATTTCTTTTAGTCCTGAAAGTTGCAACAATGGTGAATTACTTTGTATGGGATCAGCCACTTCAAGAAATGGTTATGTAAGTCTCACACCAGAGCCAGAGGAAGAACAAAGCATAGTAAATTCAGGTTCATCTAACATAGATAACAAAGTAGGAAGGGTTTTGTATCCTCATCCAGTTCATGTTTGGCCAGCAATTATCACTACTACATTCACTCTTAGGATCACTCCGTTTGCGAAAAACTCGACTAGCTCTGGTGATGGAATGGCACTTGTATTTTCTCAAGATAATAGGCCTTCTCCAAATGATAGCTATGGTTCTTATCTTGGCATGTTTGATAGGTCTACACAAGGTGGAAATTTTCAACAAATAGGTGTGGAATTGGATACATTCATGAATGAATTTGATCCAGATGGAAACCACATTGGCATAGTGACAACAAGCATAACAAATCCAGTTGCTTTTCATAGTCTCAATAACACTGAAGTTGACCTCAAAAGTGGGAGAGACATTGAGGTTAAAGTTGACTATAATGGATGGACTAAAATGATTTCTATCTCAATTGGATACTCAAATAGCCAATTGAAGAGTGTTCTCAACCATTCAATTAACTTACCTGATATAATTCCAAGCTCAGTTTATGTTGGTTTCACAGCCTCAACCGGCAAGACTTTGCCCGAAACTCATCAAATCCTAAATTGGTTTTTCACATCAGTACCATTGCCTGTTCTTTCTATTAAGCACAGTTCAATTGGAAAATTCAAGATCATAATGATGATTGTCATACCAATTCTTGTGTTATTTACCTTGCTTTCTGTTAGTCGGGAAGCTTGGAAGCGAAGATATGAGAAGGGTGATCGTAAAGAGGACATAGAAAGCCTATCAAGGACGGGTGTGGATGCGCCTAAGATGTTCGGTTACAAGGAACTGTCAAAAGCCACTTGTAAGTTCAGTAAAGAAAATATTGTGGGAAGAGGTGGATTTGGAAGTGTTTATAAAGGCTTCATGCTAGAAAATGGAAAAACCATAGCAGTAAAGAAAATTTCAGCAACTTCTAAGCAAGGTGAAAGAGAGTTCTTGGCCGAAATATGTACCATCGGCCGTCTTCGGCACAAAAACTTGGTGCAGCTCCAAGGCTGGTGCAATGAAGGCAAAAATCTTCTCTTGGTTTATGATTACATGCAAAATGGAAGCCTTGATCAATTCATAGGCAAAGATATCCTAGATTGGCAAACAAGGCACAAGATATTAACAGGATTAGCATCAGGATTACTATACCTTCATGAAGAATGTGGAAATCCAGTAGTTCATAGAGATGTTAAACCTAACAATGTAATGCTTGATTCTAATTACAACGCTCATTTAGGCGATTTCGGACTCGCAAGGTTACTCAACAATGAGGATTCTGTAACTACAAACTTAGCCGGAACACCGGGCTATTTAGCACCCGAAATAGGCTTCACAGGAAAAGCTACACCTGAATCAGATGTTTATAGCTTTGGAATGGTTATACTTGAAGTCATTTGTGGCAAAAGGTCAAAAAGAGTAATGGAAGATAATAGTTTGGTAGATTATGTTTGGAATTTACATACTCAAAATCAAATTATTGAGTGTGTTGATGAACAATTGAAAAATTGTTTTGATGTGGAAGAAGCTAAAAGGTGTTTGATGGTTGGATTAGCATGTTTGCATCCTGATTCTTTGTTTAGGCCAAAGATGAGGAAAGTTGTGCACATTTTTTTGAATCCAAATGAACCTTTAATGGAATTGCCGGAAATGCGACCGGCCGGAGTTTATGTATCATTTTCTTGTACTTCAATGACAGATTTTAGATCAAGAACTGAGTTACAGCTTCAATCATCCACAACATCAATGGAGAACATCAGTGATACTTCATTTTGTTTAAATTCATCCTCTGAGTGA | 2043 | 0.3705 | MFMFCFNPFTTTMFMFLFLFTFIKTLKVTTSTVISPTTFSFISFSPESCNNGELLCMGSATSRNGYVSLTPEPEEEQSIVNSGSSNIDNKVGRVLYPHPVHVWPAIITTTFTLRITPFAKNSTSSGDGMALVFSQDNRPSPNDSYGSYLGMFDRSTQGGNFQQIGVELDTFMNEFDPDGNHIGIVTTSITNPVAFHSLNNTEVDLKSGRDIEVKVDYNGWTKMISISIGYSNSQLKSVLNHSINLPDIIPSSVYVGFTASTGKTLPETHQILNWFFTSVPLPVLSIKHSSIGKFKIIMMIVIPILVLFTLLSVSREAWKRRYEKGDRKEDIESLSRTGVDAPKMFGYKELSKATCKFSKENIVGRGGFGSVYKGFMLENGKTIAVKKISATSKQGEREFLAEICTIGRLRHKNLVQLQGWCNEGKNLLLVYDYMQNGSLDQFIGKDILDWQTRHKILTGLASGLLYLHEECGNPVVHRDVKPNNVMLDSNYNAHLGDFGLARLLNNEDSVTTNLAGTPGYLAPEIGFTGKATPESDVYSFGMVILEVICGKRSKRVMEDNSLVDYVWNLHTQNQIIECVDEQLKNCFDVEEAKRCLMVGLACLHPDSLFRPKMRKVVHIFLNPNEPLMELPEMRPAGVYVSFSCTSMTDFRSRTELQLQSSTTSMENISDTSFCLNSSSE* | 681 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g2522 | 680 | Pfam | Protein kinase domain | 358 | 618 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2522 | 680 | Gene3D | Phosphorylase Kinase; domain 1 | 318 | 433 | - | - | |
Tpr1g2522 | 680 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 41 | 279 | IPR013320 | - | |
Tpr1g2522 | 680 | ProSiteProfiles | Protein kinase domain profile. | 357 | 621 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2522 | 680 | PANTHER | L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE | 75 | 655 | - | - | |
Tpr1g2522 | 680 | ProSitePatterns | Legume lectins beta-chain signature. | 164 | 170 | IPR019825 | - | |
Tpr1g2522 | 680 | Pfam | Legume lectin domain | 38 | 279 | IPR001220 | GO:0030246 | |
Tpr1g2522 | 680 | Gene3D | - | 36 | 287 | - | - | |
Tpr1g2522 | 680 | Gene3D | Transferase(Phosphotransferase) domain 1 | 434 | 626 | - | - | |
Tpr1g2522 | 680 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 475 | 487 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g2522 | 680 | PANTHER | - | 75 | 655 | - | - | |
Tpr1g2522 | 680 | ProSitePatterns | Protein kinases ATP-binding region signature. | 363 | 387 | IPR017441 | GO:0005524 | |
Tpr1g2522 | 680 | SUPERFAMILY | Protein kinase-like (PK-like) | 341 | 653 | IPR011009 | - | |
Tpr1g2522 | 680 | CDD | STKc_IRAK | 363 | 620 | - | - | |
Tpr1g2522 | 680 | CDD | lectin_legume_LecRK_Arcelin_ConA | 37 | 278 | IPR001220 | GO:0030246 | |
Tpr1g2522 | 680 | SMART | serkin_6 | 357 | 621 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g2522 | Tpr-Chr1 | 28635482 | 28639840 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g2522 | 15 | 655 | Receptor kinase-like Gene Family | AT5G55830 | 37.966 | 1.98e-126 | 388 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Tpr1g2522 | Pkinase | 1.3e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g2522 | - | - | ccaj:109810929 | 928.317 |