Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2522 ATGTTTATGTTTTGTTTTAATCCCTTCACAACAACCATGTTTATGTTTTTATTTTTGTTTACCTTTATCAAAACTCTAAAAGTTACAACAAGCACTGTAATTAGTCCAACTACATTCTCCTTTATTTCTTTTAGTCCTGAAAGTTGCAACAATGGTGAATTACTTTGTATGGGATCAGCCACTTCAAGAAATGGTTATGTAAGTCTCACACCAGAGCCAGAGGAAGAACAAAGCATAGTAAATTCAGGTTCATCTAACATAGATAACAAAGTAGGAAGGGTTTTGTATCCTCATCCAGTTCATGTTTGGCCAGCAATTATCACTACTACATTCACTCTTAGGATCACTCCGTTTGCGAAAAACTCGACTAGCTCTGGTGATGGAATGGCACTTGTATTTTCTCAAGATAATAGGCCTTCTCCAAATGATAGCTATGGTTCTTATCTTGGCATGTTTGATAGGTCTACACAAGGTGGAAATTTTCAACAAATAGGTGTGGAATTGGATACATTCATGAATGAATTTGATCCAGATGGAAACCACATTGGCATAGTGACAACAAGCATAACAAATCCAGTTGCTTTTCATAGTCTCAATAACACTGAAGTTGACCTCAAAAGTGGGAGAGACATTGAGGTTAAAGTTGACTATAATGGATGGACTAAAATGATTTCTATCTCAATTGGATACTCAAATAGCCAATTGAAGAGTGTTCTCAACCATTCAATTAACTTACCTGATATAATTCCAAGCTCAGTTTATGTTGGTTTCACAGCCTCAACCGGCAAGACTTTGCCCGAAACTCATCAAATCCTAAATTGGTTTTTCACATCAGTACCATTGCCTGTTCTTTCTATTAAGCACAGTTCAATTGGAAAATTCAAGATCATAATGATGATTGTCATACCAATTCTTGTGTTATTTACCTTGCTTTCTGTTAGTCGGGAAGCTTGGAAGCGAAGATATGAGAAGGGTGATCGTAAAGAGGACATAGAAAGCCTATCAAGGACGGGTGTGGATGCGCCTAAGATGTTCGGTTACAAGGAACTGTCAAAAGCCACTTGTAAGTTCAGTAAAGAAAATATTGTGGGAAGAGGTGGATTTGGAAGTGTTTATAAAGGCTTCATGCTAGAAAATGGAAAAACCATAGCAGTAAAGAAAATTTCAGCAACTTCTAAGCAAGGTGAAAGAGAGTTCTTGGCCGAAATATGTACCATCGGCCGTCTTCGGCACAAAAACTTGGTGCAGCTCCAAGGCTGGTGCAATGAAGGCAAAAATCTTCTCTTGGTTTATGATTACATGCAAAATGGAAGCCTTGATCAATTCATAGGCAAAGATATCCTAGATTGGCAAACAAGGCACAAGATATTAACAGGATTAGCATCAGGATTACTATACCTTCATGAAGAATGTGGAAATCCAGTAGTTCATAGAGATGTTAAACCTAACAATGTAATGCTTGATTCTAATTACAACGCTCATTTAGGCGATTTCGGACTCGCAAGGTTACTCAACAATGAGGATTCTGTAACTACAAACTTAGCCGGAACACCGGGCTATTTAGCACCCGAAATAGGCTTCACAGGAAAAGCTACACCTGAATCAGATGTTTATAGCTTTGGAATGGTTATACTTGAAGTCATTTGTGGCAAAAGGTCAAAAAGAGTAATGGAAGATAATAGTTTGGTAGATTATGTTTGGAATTTACATACTCAAAATCAAATTATTGAGTGTGTTGATGAACAATTGAAAAATTGTTTTGATGTGGAAGAAGCTAAAAGGTGTTTGATGGTTGGATTAGCATGTTTGCATCCTGATTCTTTGTTTAGGCCAAAGATGAGGAAAGTTGTGCACATTTTTTTGAATCCAAATGAACCTTTAATGGAATTGCCGGAAATGCGACCGGCCGGAGTTTATGTATCATTTTCTTGTACTTCAATGACAGATTTTAGATCAAGAACTGAGTTACAGCTTCAATCATCCACAACATCAATGGAGAACATCAGTGATACTTCATTTTGTTTAAATTCATCCTCTGAGTGA 2043 0.3705 MFMFCFNPFTTTMFMFLFLFTFIKTLKVTTSTVISPTTFSFISFSPESCNNGELLCMGSATSRNGYVSLTPEPEEEQSIVNSGSSNIDNKVGRVLYPHPVHVWPAIITTTFTLRITPFAKNSTSSGDGMALVFSQDNRPSPNDSYGSYLGMFDRSTQGGNFQQIGVELDTFMNEFDPDGNHIGIVTTSITNPVAFHSLNNTEVDLKSGRDIEVKVDYNGWTKMISISIGYSNSQLKSVLNHSINLPDIIPSSVYVGFTASTGKTLPETHQILNWFFTSVPLPVLSIKHSSIGKFKIIMMIVIPILVLFTLLSVSREAWKRRYEKGDRKEDIESLSRTGVDAPKMFGYKELSKATCKFSKENIVGRGGFGSVYKGFMLENGKTIAVKKISATSKQGEREFLAEICTIGRLRHKNLVQLQGWCNEGKNLLLVYDYMQNGSLDQFIGKDILDWQTRHKILTGLASGLLYLHEECGNPVVHRDVKPNNVMLDSNYNAHLGDFGLARLLNNEDSVTTNLAGTPGYLAPEIGFTGKATPESDVYSFGMVILEVICGKRSKRVMEDNSLVDYVWNLHTQNQIIECVDEQLKNCFDVEEAKRCLMVGLACLHPDSLFRPKMRKVVHIFLNPNEPLMELPEMRPAGVYVSFSCTSMTDFRSRTELQLQSSTTSMENISDTSFCLNSSSE* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2522 680 Pfam Protein kinase domain 358 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2522 680 Gene3D Phosphorylase Kinase; domain 1 318 433 - -
Tpr1g2522 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 279 IPR013320 -
Tpr1g2522 680 ProSiteProfiles Protein kinase domain profile. 357 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2522 680 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 75 655 - -
Tpr1g2522 680 ProSitePatterns Legume lectins beta-chain signature. 164 170 IPR019825 -
Tpr1g2522 680 Pfam Legume lectin domain 38 279 IPR001220 GO:0030246
Tpr1g2522 680 Gene3D - 36 287 - -
Tpr1g2522 680 Gene3D Transferase(Phosphotransferase) domain 1 434 626 - -
Tpr1g2522 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Tpr1g2522 680 PANTHER - 75 655 - -
Tpr1g2522 680 ProSitePatterns Protein kinases ATP-binding region signature. 363 387 IPR017441 GO:0005524
Tpr1g2522 680 SUPERFAMILY Protein kinase-like (PK-like) 341 653 IPR011009 -
Tpr1g2522 680 CDD STKc_IRAK 363 620 - -
Tpr1g2522 680 CDD lectin_legume_LecRK_Arcelin_ConA 37 278 IPR001220 GO:0030246
Tpr1g2522 680 SMART serkin_6 357 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2522 Tpr-Chr1 28635482 28639840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2522 15 655 Receptor kinase-like Gene Family AT5G55830 37.966 1.98e-126 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr1g2522 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2522 - - ccaj:109810929 928.317