Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2510 ATGGCAGAATCACTCCTCTTCAGTGTTGCCGAGACATTCATAGGCAAACTTACTTCTCGAGTTCTTGATGAAGCTTCCTTGGCACTAGGTGTGTATGACGATTTACGACGGATCAAAGACACTTCATCTCTAATCAAAGCTGTGTTGTTGGATGCTGAACAAAAGCAGTGGCAGAACAATGAGTTGCGTGAATGGTTGAGACAGATTAAGCATGTCTTCTCTGATGCCGAAGATGTAATCGATGATTTCGAGTGCGAGGCATTGCGGATGCAAGTTGTCAACACCTCTGGTAGCATTAGAAGGAAGGTACGTCATTACTTCTCAAGTTCTAATCCACTAGCATATCGCCTCAAGATGGCACATCAAATCAAAGATATCAATGCGAGATTAACTAAGGTTGCAGCTGATAGGCATAATTTTGGCCTTCAAACCAATTATAGTGATACTCGTATTGTGCAAAAGCGCGAATTAACTCATTCTCATATAATTGAGTCAGATGTCATAGGAAGAGAGCATGATAAACAAATAATCATAGACCTCTTGTTGCAAGATGGTGATGATAAAAGTCTATCTGTTATTCCTATCGTGGGAATGGGGGGTATGGGAAAGACTACACTTGCAAAATCGGTGTTCAATGATGAACGTTTAGGCGAGGCTTTTCAACAAAAGATGTGGGTATGTGTCTCTCATGATTTTGAACTTAAGCATTTACTTGTTAAAATCCTCAATTCTGCTAGTGATTCTTCTCCTAGTGAAAACATTCAAAACTTTGATATAGAGCAATTACAAAATCACTTAAGAAATACACTTGCCGATCAAAAGTTCTTGCTCGTCCTAGACGACGTATGGAACGAGAATCGGGTCAAATGGGAAGAATTGAAGGATTTAATACAACTATGTGCTAATGGAAGTAAAGTACTAGTGACTACACGTAGCCATAAAACAGCTGATATGATGAGCACTAACACATCTCACATTTTAGAAGGTCTTTCCCCAAAGGATTCATTGACTGTATTTATTAAATGGGCTTTCAAAGAAGGAGAAGATAAAAAACATCCAGAGTTGATGGAGGTGGGAGAAAATATTGTGAAAAAATGTGGAGGCCTTCCTTTGGCAATAAGAACATTGGGGAGTTCCCTATTCTTAAAATTTGATATAGAAGAGTGGAATTTTGTCAAAGATAGTGAACTTTGGAATTTACCACAACAAGATGATGGTATTTTGCCGGCTATCAAATTGAGTTATGACCAATTACCTTCTTACTTAAAACAATGTTTTGCATGCTTCTCCCTCTTTGAAAAGAGCTTTTATTATTATGATCCTGAGGTTACTGGAATTTGGGACGCACTGGATTTTCTTCCAACACCAGAAAATGGTGAAAATTCAGGAGATATTGGAAAGCAACTCTTGCTTGAGCTATGGTCAAGGTCTTTTCTTCAAAATTTTGTATATGTCGGTGGAAGTTTTTGTTTTGAATTGCACGATTTGGTGCATGATCTTGCATTATATGTTGCAAGAGATGATTTTCAACTGTTGAACTTTCAATATGAAAATATAAGAGAGAATGTCCGCCATTTGTCAGTTCTTCAAAATGATTTGCTTAGCCAAATTTCAATTCCGACTGGGTTGAGAACCATACTTTTTCCTGATGGAGCTAACAGTAAACCTTTCTTGAATAATTGTCTATCAAGGTGCAAATACTTACGACTTTTGGAAATAAATAATTCTAGATACAAAAATTTGCCCCGCTCCATTGGTAAGTTGAAACATTTACGATGTCTCAGACTTGTAAACAATCAGGAATTGGAGAGGCTTCCTGATTCTGTTTGCAAACTACAAAATTTGCAAACATTGGAACTCACTAATTGTCAAAAACTACAAAAATTGCCCAATGGAATAGGAAATTTGATCAAACTTCAAGAACTATATATAACCACAAGGCAATCTAACTTCCCAAAAGAGTTAGCCAAATTGTCTTCTCTAAAAATTCTAGAATTCAGTTATTGTGATAATTTGATGTTTTCTTTTGAAGGAATACAATTTCCTAAACTTAAATTGTTAGCTTTTGCATCTTGTGGGAATCTGAAGTCATTGCCATTTCATATCATTCCAAATATAGAGACTTTGATCATTGTTGACTGTAATATGGTGATATTGTCAATGGGTGATAACAACAACCAAATACCCAATATAAAGTTAAAGTTCCTAAGTCTTGACTCCTTGCCTCAAATAGTTACTTTTCCACAATGGTTTCAAGGATGTGCAAACACCCTATATACCTTAGGTATTCAAAACTGTGAAAATCTTGAGGAGCTTCCTAACTGGTTGTCAACTTTTATTTCTCTCAAGATGCTTTTAATTGCAAACTGTCCAAAATTGATTTCACTCCCTGAAGATGTGCATCACCTTCCAAACCTTGAACATTTAATAATGAGTGGTTGTCCTGAATTATATAGAAGATACGAGCCAGAAGTTGGACAAGATTGGTACAAGATATCACATATCAAAGATGTTACCGTTGAATTAGAAGAAACTGAAGATTAA 2544 0.3628 MAESLLFSVAETFIGKLTSRVLDEASLALGVYDDLRRIKDTSSLIKAVLLDAEQKQWQNNELREWLRQIKHVFSDAEDVIDDFECEALRMQVVNTSGSIRRKVRHYFSSSNPLAYRLKMAHQIKDINARLTKVAADRHNFGLQTNYSDTRIVQKRELTHSHIIESDVIGREHDKQIIIDLLLQDGDDKSLSVIPIVGMGGMGKTTLAKSVFNDERLGEAFQQKMWVCVSHDFELKHLLVKILNSASDSSPSENIQNFDIEQLQNHLRNTLADQKFLLVLDDVWNENRVKWEELKDLIQLCANGSKVLVTTRSHKTADMMSTNTSHILEGLSPKDSLTVFIKWAFKEGEDKKHPELMEVGENIVKKCGGLPLAIRTLGSSLFLKFDIEEWNFVKDSELWNLPQQDDGILPAIKLSYDQLPSYLKQCFACFSLFEKSFYYYDPEVTGIWDALDFLPTPENGENSGDIGKQLLLELWSRSFLQNFVYVGGSFCFELHDLVHDLALYVARDDFQLLNFQYENIRENVRHLSVLQNDLLSQISIPTGLRTILFPDGANSKPFLNNCLSRCKYLRLLEINNSRYKNLPRSIGKLKHLRCLRLVNNQELERLPDSVCKLQNLQTLELTNCQKLQKLPNGIGNLIKLQELYITTRQSNFPKELAKLSSLKILEFSYCDNLMFSFEGIQFPKLKLLAFASCGNLKSLPFHIIPNIETLIIVDCNMVILSMGDNNNQIPNIKLKFLSLDSLPQIVTFPQWFQGCANTLYTLGIQNCENLEELPNWLSTFISLKMLLIANCPKLISLPEDVHHLPNLEHLIMSGCPELYRRYEPEVGQDWYKISHIKDVTVELEETED* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2510 847 SUPERFAMILY L domain-like 493 815 - -
Tpr1g2510 847 PRINTS Disease resistance protein signature 192 207 - -
Tpr1g2510 847 PRINTS Disease resistance protein signature 269 283 - -
Tpr1g2510 847 PRINTS Disease resistance protein signature 366 380 - -
Tpr1g2510 847 PRINTS Disease resistance protein signature 610 626 - -
Tpr1g2510 847 Gene3D - 149 327 IPR027417 -
Tpr1g2510 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 428 IPR027417 -
Tpr1g2510 847 Gene3D Ribonuclease Inhibitor 509 677 IPR032675 -
Tpr1g2510 847 Gene3D Ribonuclease Inhibitor 678 823 IPR032675 -
Tpr1g2510 847 CDD RX-CC_like 8 134 IPR038005 -
Tpr1g2510 847 Pfam NB-ARC domain 171 416 IPR002182 GO:0043531
Tpr1g2510 847 Gene3D - 10 124 - -
Tpr1g2510 847 PANTHER DISEASE RESISTANCE PROTEIN RP 33 818 IPR044974 GO:0006952
Tpr1g2510 847 PANTHER OS08G0543100 PROTEIN 33 818 - -
Tpr1g2510 847 Pfam Rx N-terminal domain 11 98 IPR041118 -
Tpr1g2510 847 Gene3D - 329 419 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2510 Tpr-Chr1 28500739 28503527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2510 190 813 WRKY Transcription Factor Family AT5G45050 24.741 3.32e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2510 - - mtr:MTR_7g078640 1058.51