Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2505 ATGGCAGAATCACTCCTCTTCAGTGTTGCCGAGACATTCATAGGCAAACTTACTTCTCGAGTTCTTGATGAAGCTTCCTTGGCACTAGGTGTGTATGACGATTTACGACGGATCAAAGACACTTCATCTCTAATCAAAGCTGTGTTATTGGATGCTGAACAAAAGCAGTGGCAGAACAATGAGTTGCGTGAATGGTTGAGACAGATTAAGCATGTCTTCTCTGATGCCGAAGATGTCATCGATGATTTCGAGTGCGAGGCATTGCGGATGCAAGTTGTCAACACCTCTGGTAGCATTAGAAGGAAGGTACGTCATTACTTCTCAAGTTCTAATCCACTAGCATATCGCCTCAAGATGGCACATCAAATCAAAGATATCAATGCGAGATTAACTAAGGTTGCAGCTGATAGGCATAATTTTGGCCTTCAAAACAATTATAGTGATACTCGTATTGTTCAAAAGCGCGAATTAACTCATTCTCATATAATTGAGTCAGATGTCATAGGAAGAGAGCATGATAAACAAATAATCATAGACCTCTTGTTGCAAGATGGTGATGATAAAAGTCTATCTGTTATTCCCATCGTGGGAATGGGGGGTATGGGAAAGACTACACTTGCAAAATTGGTGTTCAATGATGAACGTTTAGGCGAGGCTTTTCAAAAAAAGATGTGGGCATGTGTCTCTCACGATTTTGAACTTAAGCATTTACTTGTTAAAATCCTCAATTCTGCTTGTGATTCTTCTCCTAATACATTTCAACGAGAAAACATTCAAAACTTTGATATAGAGCAATTACAAAATCAGTTAAGAAATACACTTGCCGATCAAAAGTTCTTGCTCGTCCTAGACGACGTATGGAACGAGAATCGGGTCAAATGGGAAAAATTGAAGGATTTAATTCAAGTATGTGCTAAAGGAAGTAAAGTACTAGTGACTACACGTAGCCATAAAACAGCTGATGTGATGAGCACTAACACATCTCACATTTTAGAAGGTCTTTCTCAAAGTGATTCATTGTCTGTATTTGTTAAATGGGCTTTCAAAGAAGGAGAAGATAAAAAACATCCAGAATTGATGGAGGTGGGAGAAAATATTGTGAGAAAATGTGGAGGCCTTCCTTTGGCTATAAGAACATTGGGGAGTTCCCTATACTTAAAATTTGATATAGGAGAGTGGAATTTTGTCAAAGATAGTGAGATTTGGAATTTACCACAACAAGATGATGGTATTTTGCCGGCTATCAAATTGAGTTATGATCAATTACCTTCTTACTTAAAACGATGTTTTGCATGTTTCTCCCTATTTGAAAGGAGAACTGTTCAGAATGTTGTTGACGTTACTGCATTTTGGAACGCACTGGGTTTTCTTCCAACACCAAAACAAGGTGAAAATAAGGGAGATATTGGAAAGCAACTCTTGCATGAGCTATGGTCAAGGTCTTTTGTTCAAAATTGTATAGATGCAGGTGGTTTTTTCAGTTTTGAATTGCACGATTTGGTGCATGATCTTGCATTATATGTTGCAAGAGATGATTTTCAACTGTTAAACTTTAAATGTAAAAATATAAGAGAGAATGTCCGCCATTTGTCAATTCTTGAAAATGATTTGGTCGGCCAAATTTCAATTCCCACCGGGTTGAGAACCATTCTTTTTCCTGTAGGAGCAAATAATAAACCTTTCTTGAATACTTGTCTATCAAGGTGCAAATACTTGCGGCTTTTGCAATTAAATAAAGCGAGATACAAAAATTTGCCCCGCTCCATTGGCAAGTTGAAACATTTAAGATGTCTCAGTCTTAAAGGTAATATGGAATTGGAGAGGCTTCCTGGTTCTGTTAGCAAACTCCAAAATTTGCAAACTTTAAATCTCATTGGATGTGAAAAGCTACAAAAATTGCCCAATGGAATAGGAAATTTGATCAAACTTCAAGAACTATATATAACCACAATGCAATCTAACTTCCCAGAAGAGTTAGCCAAATTGTCTTCTCTAGAAATTCTAGCATTCAGTAATTGTGATAATTTGATGTTTTCTTTTGAAGGAATACAATTTCCTAAACTTAAATTGTTAAGTTTTTCATATTGTGGGAATCTGAAGTCATTGCCATTTCATATCATTCCAAATATAGAGAGTTTGATCATTATGGACTGTAATATGGTGATATTGTCAATGGGTGATAACAACAACCAAATACCCAATTTGAAGTTAAAGTTTGTTAGTCTTGAGTCTTTGCCTCAAATAGTTACTTTTCCACAATGGCTTCAAGGATGTGCAAACACCCTACATTCCTTAGGTATTGAAAACTGTGAAAATCTTGAGGAGCTTCCTAACTGGTTGTCAACTTTTATTTCTCTCAAGAATCTTTTAATTGAAAACTGTCCAAAATTGATTTCACTCCCTGAAGATGTGCATCACCTTCCAAACCTTGAAAGTTTAGCAATGAGTGGTTGTCCTGAGTTATATAGAAGATACGAGCCAGAAGTTGGACAAGATTGGTGCAAGATATCACATATCAAAGAAGTTAGCGTTGAATTACAAGAAACTGAAGATTAA 2556 0.365 MAESLLFSVAETFIGKLTSRVLDEASLALGVYDDLRRIKDTSSLIKAVLLDAEQKQWQNNELREWLRQIKHVFSDAEDVIDDFECEALRMQVVNTSGSIRRKVRHYFSSSNPLAYRLKMAHQIKDINARLTKVAADRHNFGLQNNYSDTRIVQKRELTHSHIIESDVIGREHDKQIIIDLLLQDGDDKSLSVIPIVGMGGMGKTTLAKLVFNDERLGEAFQKKMWACVSHDFELKHLLVKILNSACDSSPNTFQRENIQNFDIEQLQNQLRNTLADQKFLLVLDDVWNENRVKWEKLKDLIQVCAKGSKVLVTTRSHKTADVMSTNTSHILEGLSQSDSLSVFVKWAFKEGEDKKHPELMEVGENIVRKCGGLPLAIRTLGSSLYLKFDIGEWNFVKDSEIWNLPQQDDGILPAIKLSYDQLPSYLKRCFACFSLFERRTVQNVVDVTAFWNALGFLPTPKQGENKGDIGKQLLHELWSRSFVQNCIDAGGFFSFELHDLVHDLALYVARDDFQLLNFKCKNIRENVRHLSILENDLVGQISIPTGLRTILFPVGANNKPFLNTCLSRCKYLRLLQLNKARYKNLPRSIGKLKHLRCLSLKGNMELERLPGSVSKLQNLQTLNLIGCEKLQKLPNGIGNLIKLQELYITTMQSNFPEELAKLSSLEILAFSNCDNLMFSFEGIQFPKLKLLSFSYCGNLKSLPFHIIPNIESLIIMDCNMVILSMGDNNNQIPNLKLKFVSLESLPQIVTFPQWLQGCANTLHSLGIENCENLEELPNWLSTFISLKNLLIENCPKLISLPEDVHHLPNLESLAMSGCPELYRRYEPEVGQDWCKISHIKEVSVELQETED* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2505 851 Pfam Rx N-terminal domain 11 98 IPR041118 -
Tpr1g2505 851 PRINTS Disease resistance protein signature 192 207 - -
Tpr1g2505 851 PRINTS Disease resistance protein signature 273 287 - -
Tpr1g2505 851 PRINTS Disease resistance protein signature 370 384 - -
Tpr1g2505 851 PRINTS Disease resistance protein signature 614 630 - -
Tpr1g2505 851 PANTHER OS08G0543100 PROTEIN 33 823 - -
Tpr1g2505 851 Gene3D Ribonuclease Inhibitor 512 848 IPR032675 -
Tpr1g2505 851 Gene3D - 149 331 IPR027417 -
Tpr1g2505 851 CDD RX-CC_like 8 134 IPR038005 -
Tpr1g2505 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 432 IPR027417 -
Tpr1g2505 851 SUPERFAMILY L domain-like 497 821 - -
Tpr1g2505 851 Gene3D - 333 423 IPR042197 -
Tpr1g2505 851 PANTHER DISEASE RESISTANCE PROTEIN RP 33 823 IPR044974 GO:0006952
Tpr1g2505 851 Gene3D - 10 124 - -
Tpr1g2505 851 Pfam NB-ARC domain 171 420 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2505 Tpr-Chr1 28472193 28476343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2505 190 821 WRKY Transcription Factor Family AT5G45050 23.929 7.38e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2505 - - mtr:MTR_7g078640 1062.37