Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2475 ATGGAAATTCTAACTTCCATTGTTGGAAAAGTAGTAGATTATACTGTTGCGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGCAATTTTAAGATGTTAGCGGATAATGTCAATGACCTCCAGGCTGCAAGAGAAAGAGTATTTCATTCGGTTGAAGAAGAAAGGCGAAATGGTAAAGAAATTGAAAGAGATGTGGTGAACTGGTTGGAGAAAGTGAACGAGGTAATTGAAACTGCAAATCAGCTTCAACAAGAACCTCGTCGTGCCAATGTCAGGTGCTCAACATGGGGGTTCCCCAATTTGATTTTGCGTCATCAACTAAGTAGGAAAGCAACAAAAATTGCACACGATGTTGTCCAAGTTCACGGAAAAGGGATGTTTGATCGATTTGGTTACCTTCCAAGCCTAGATGGAGTAGCATCCTCTTCCTCAACAAGAGGTAATGAAAAGTATGAGACAAGGGAGTCCCTTAAGGAGGATATTGTGAAGGCTCTATCAGACCTCAATTCACGCAACATTGGGGTCTATGGTTTGGGTGGGGTGGGTAAGACCACTCTGGTGGAAGATGTTGCTCTAATAGCAAAGCAACATAAGTTGTTCGATAAAGTGGTTATAGCACATGTATCCAAAAATCCAGACTTTAAAACCATTCAAGGAGAGATTGCAGATTTGTTGGGTTTGCGATTCGATGAGGAGACAATTTTTGGAAGAGCAAATCGCCTAAGACAAAGAATCAAGATGGAGAAAAGTATCCTTGTCATTCTAGATAATATATGGACCATGCTTGATTTGAAGGAAGTGGGAATCCCATTTGGTAATGAACATAATGGATGCAAATTATTGATGACAAGTAGAAATCAAGATGTGTTGGTGCAAATGGATGTTCCAAAGAATTTCACTTTCAAACTTGAACTTATGAGTGAAAACGAGACATGGAACTTGTTTCAATTTATGGCTGGGGATGTGGTTAAAGATAAAAATTTAAAAGATGTAGCATTTCAAGTTGCCCAAAAATGTGAAGGTTTGCCTCTTAGGGTAGTGACAGTGGCACGTGCAATGAGAAATAAGAGAGACATGCAATCTTGGAAAGAGGTATTGAGGAAATTACAATGTAATGATCATATAGAGATGGACGGGTTAACTTATTCTGCTTTGGAATTGAGTTACAACTCGTTGGAGAGTGATGAAATGAGGGATCTCTTCCTTCTTTTTGCATTAATCAAAGGTGAAAATGTAGAGTACTTTCTGAAAGTTGCAATGGGTTTGAATATATTAAAGTATGTTAATACCATGGATGAGGCAAGAAACAAACTTTACACAATAATCAGAGCTTTGGAGGAGACTTGTCTTTTGCTTGATGTTAAAACAGGTGGGAATATCCTAATGCATGATTTTGTTTGTGATTTTGCTACCTTCATAGCATGTAGGGACAAACATGTATTTCTAAGAAAACAGTCAAATGAAGAATTGCCAACCAATGCTTTTTTAAATAGGTGCATGCAGATTGTTCTACGACAGTGTCATATCCAGGAGCTTCCACGAACGATTGTTTGTCCAAACATTAAGTTGTTCTTTTTGTCTAGTAAGAACCGATCTTTAAAGATCCCCGATACTTTTTTTGAGGGGTTGGGCAGCCTTAGAGTGCTAAATTTAACATGTCTGAACTTGTCTTCATTACCCACCTCATTTCGGTTCCTACCCGACCTTAAAACCCTGTGTTTGGATTTCTGCATTTTGGAAAATATGGATGCAATAGAAGGTCTGCAAAATTTAGAAATTCTTCGCATTTGGAAATCATCTATGATCAAGTTCCCGAGAGAAATAGGGAGATTGACTCAATTGAGAATGCTTGATTTGAGCAATTCAGGAATTGAAGTACTCCCATCCAATATTTTATCAAGTTTGATTAAATTGGAGGAGTTGTACATGGGCAATACCTCTATTAATTGGGAAGATGTGAATTCAACCGTTCAAAATGGAAATGCTAGCATTGCTGAGCTTCATAAACTACCCAACTTGACTGCTCTAGAATTACAAATTCGAGAGACTTGGATGTTGCCAAGTGACATTCAATTGATGTTTGAGAAGCTGAATCTTTTTAAAATTGCTATTGGAGATGTATGGGAATGGGCAGACATTAAGGATGGAACCTTAAAAACATTGATGCTCAAACTTGGTACCAACATACATTTAGAGCACGGAATTAAAGCATTGATTAAAGATGTTGAGAATTTGTACTTGGATGATGTTGATGGAATTCATAATGTGCTATATCAACTAAATGGGAAAGGATTTCCATTGCTGAAACATCTTCGCGTCCAAAATAATGCAAACATGAAGCACATTGTTGACTCGAAAGAGAGGAATCAAATCCATGTGTCCTTTCCCATCTTGGAAACACTAGTACTTCACAATCTTAAAAACTTGGAGCATATATGTCATGGTCCACTTTCAATTACTTCTTTTGGATGTCTTAGTGTTATCAAAGTCAAAAATTGTGTCCAATTAAAATATCTTTTCTCCTATACAATGGTTAAAGGACTTTCCCACCTTTCAGAAATTGAAGTCTGCGACTGCAATTATATGAAGGAGATAGTGATCGAAGACATCAATTCAAGTGCAAATAATGATACAGCTAATGAAAAAATTGATTTTCTTCTATTGCGTTCTTTGACTTTAGAACATTTGGAGACAATTGATGATTTCTTCTCTTATTCTTCGACGGTTTCCAGAAGTAAGCAAAATTATCATGGTTTAGAGCCTGATGTTTCTGCTCCTTTTTTCAATGCTCAGGTTGCATTTCCTAATTTGGATACCCTCAAATTAAGCTCACTCCTGAATTTGAATAAAATTTGGGATGACAATTATCATTCAATGTACAACTTGACAAGCTTGATTGTGGATAATTGTGGCGGGTTGAAATACTTATTCTCATCTACTGTGGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATAAGTAATTGTGCTATGATGGAGGAGATTATAACTAAAGAAGAGGGAAACAGTGCATCAGAAGAGGTTCAGTTTTGCAAATTAGAGAAAATCATATTGAAGGACATGGAGAACTTGAAGACAATATGGCACCGGCAATTTGAAACTTCGAAGATGTTGCAAGTGAAGAATTGTAATAAAATTGTGGTGGTTTTTCCCTCTTCAATGCAAAAAAGATATAATAAGCTAGAGATGTTGGAGGTTACAAATTGTGCTTTAGTGGAAGCAATATTTGAACTGAGCTTCAAAGAAAGTACCAGTGTAGAAGATACAACCCATTTGAAAGAAGTTACTATAGATGGATTGCCGAAGCTAAAAAAGATATGGAGTGGGAATCCTGAAGAAATTCTTAGTTTCCAAAATCTAATAAATGTAAAACTAAAATTTTGTGCAAGCTTGGAGTATCTATTACCACTTTCCGTAGCCACTCGTTGCTCACATCTCAAGGAACTTCATATAATAGACTGTGGAAACATGAAGGAAATTGTTGCAGAGGAGAAAGAATCTAGTGTGAATGTAGCTCCCATATTTGAGTTAAATCAACTGAGTACTTTATTGCTTTGGTATTTAGGTAAACTCAAGGGTTTCTATGCTAAAAAGCATACCGTATCATGTCCATCTTTGAATGACATTGATGTCGTTCATTGTCCAAAGTTGAATTTGTACAGACCTCTATCTACAAGAAGCTCCAATCGTCAAGATGACAACCTCTTTGTTATAACGCAAGAACCACCTTTCATTGTCGAAGAGGTGATTCCAAATTTGGAAAAGTTGAGAATAGATTGTAAGGAAGCTAACATGATATTGCAAGCCCAAAACTCAAGTGGCCTATTCACAAAGATGGCATCTCTTCGTTTGTCTTCTTATAAGAATGAAGATATTCAATTTCCTTACCGGTTTCTACAAAATGTGCGCAGTCTTGAGTATTTATGTGTTGAACATAGTTGCTTTAAGAAGATATTCCAAAATGTGAGGAAGGATTTCATTGGTTGCACAAAAATTAAACGGTTGTCATTGGTTGCATTACCTAACCTTGAACATATATGTGAGGAAGGATTTCAAACTGACTCAGTTCTTGAGTTCCTTGATTTCTTATGGGTTTATAGTTGTTCTAGTCTGATAAATTTGCTGCCTTCCTCAGTCACCTTTACTCATTTGGTATATTTAGGGATAAAAGATTGCAATGGGCTAACAAAATTAATTACATCTCTTACCGCACAAAGTTTGAACAAGCTCGTAACACTAAAGATAGAAGACTGTGCTTCACTTGAAGAAATAATTATTGCAGAGGAAAACATTCACATTACATTTATTAGTTTACAAATATTGATGTTGGAATGTTTGCCTAGCCTCAATCAGTTTTGCTCCAGTAAGTGCTTCTTCAAATTTCCATTGTTGGAAGTAGTAATTGTGAGAGAATGTCCCCGCATGAAGGTTTTTTCTGAAGGATACACAAGTACACCAAATCTTCAAAAAGTTAAAACTGCAGAAAATGATGAAGAATGGTTTTGGAAGGGAAACCTAAATGATACAATAACCAGCATGTTTGAAGATAAGGTTGCATTTCGTAAATTCAAATATTTGGCCTTATCTGACTACCCTGAGATGAAGGATTTGTGGTATAGTGAAATTGAACAAAATGTATTTTGCAATTTGAAACATCTAGTGGTGCACAGATGTGATTTTTTATCACATGTACTTTTTCCATCAAATGTGATGCAAGTGCTATATGGATTGGAAGAACTAGAAGTGAGAGATTGTGATTCATTAGAAGCAGTGTTTGATGTGAAAGGTATGAAGTCTAAAGACACATTGGTGAAACAAAGGACTCAATTGAAAAAATTGACTTTGTCTAGTTTACCAAAATTGAAGCAAATATGGAATGAGGATCCTCATGAAATTATAAACTTTGGAAACTTATGCATGGTGAAAGTTTCTAAGTGTCAAAGTTTGTTATATATATTTCCATTGTCACTATGTGAAGATCTTGTACATCTTGAAAAGCTTGTGATAGACTCTTTCGGAGTTGAGGAAATTGTTGCAATGGGAGAAGGATCAATGGAACATAGCTTTACTTTTCCTCAATTGAATAAATTGCGACTAATTAGTTTGAAAAATCTTACGAGCTTCTACCGTGGAAAGCATTCTCTAGATTTGCCTTCATTAAAGGAACTTGAAGTATCTCGTTGTGCCTTCAACCATTTGGAATTGTTTTCTATTGAAAAGTTGAGTCGCAACTTGGAGGAATTGACAATAAATCGTACAGATTTGTTGGAAGTGTTGAATCAAGAACATATCTTTGAAAAAGTCCAAACTCTATATTTGCGATACTTGGATGAAACTCCTACAACTTTTTTGAATAAATATTCTCACACAATATTTCCTAATCTTGATACATTATGTGTGCGTCAAAGTTATATTGGAACATTATTCTCCGCTACTAGTTATCCCAGAATGCAAATTTCAAAGCAAATAAAAACTTTGATGCTTTCTGAATTGGAAATGCTCAAGCACATCTGGCAAGAAGACTTTCCATTGGACTATCTTTTGTTACAAGATCTTCGTGAATTATATGTACGGAATTGTCCACGTTTGATAAGCTTGGCACCATCGTCAACATCTTTCACAAATTTAACTACTTTGGTAGTGGACAGTTGCAAGAAGCTGAATTATTTGATGACATCTTCAACAGCTAAAAGCTTAATTCAACTCAAAATATTGAAAATAATGAATTGTAAGAAGATGTCGGATGTTGTGAATATTGATGATGAAAAAGCGGATGTTGTGAATATTGATGATGAAAAAGCAGATCAGGAAGACATCATATTTGAAAACTTGGAAGTCATGGAATTAACTTCTTTGTCAAGTTTGAGAAGCTTCTGCAATGGGAATCAAACATTCATATTCCCATCTTTGCAATCTCTCACTGTTCAAGAATGCCCTAAAATGGAGATCTTCTCATCAGGAGTCACGGTAGCACCATATTTGACAGAAATTGAAGTGGTAGAAGGAACTATGCGATGGAAAGGTGACATTAACACAACTATTCAACATTTATTCTTAGAAAAGTTGAGCCACAACCGGGATTATTTGAAGATAAATGGCACAGATGTGTTGGAAATATTGAATCAAGAAAATATCTTTCCAAATGTTCGAATTCTTGATTTGCAATACTTCGATGAAACTCCTACTACTTTTCTGAATGAATATTGTCATACAATGTTTCCTAATCTTGCAACATTTGTTGTGCATAATAGTTCTTTTGAGACATTGTTCCCAAGCACTACCGGTTATCTAAGTATGCAAATTTCAATGCAAATAAAAGCTTTAACTCTTCGTGAATTGGAAAGTCTCAAGCACATATGGCAAGAAGACTTTCCATTGGAGCATCCTCTGTTAAAAGATCTTCATGAATTATATGTGTTTAATTGTCCGAGTTTAATAAGCTTGGTACCATCGTCGACATCTTTCACAAATTTAACCTGTTTGATGGTGTTCGATTGCAAAGAGCTGGTATATTTGATAACATCTTCAACAGCTAAAAGCTTAATTCTACTCAGAACATTAAAAATAAGCAATTGTGAGAAGATGTCGGATGTTGTGAAGATTGATGATGAAAAAGCAGATCAGGAAGACATCATATTTCAAAACTTGGAAGCCATGGAATTCCTTTCTTTGTCAAGTTTGGGAAGCTTCTGCAATGGGAATCAAACTTTCATATTCCCATCTTTGCTATGGCTCACTGTTAAAGAATGCCCTCAAATGGAAATCTTCTCATCAGGAGTCACAGTAGCACCATGTCTAAGAGGAATTAAAGTGGCAGAAGAAACTCTTCGATGGAAAGATGACATTAACACAACTATTCAGCATTTTTTCCAAGAAAAGAAAGCCCAACGTTCTAATGCGCTGAATGAGACCATCATATCCTCACATTTGCAAGGTCACATCATGCGGTCAGACTCAGACTCTGAGGAGTGA 7002 0.359 MEILTSIVGKVVDYTVAPIGRQASYLIFYKGNFKMLADNVNDLQAARERVFHSVEEERRNGKEIERDVVNWLEKVNEVIETANQLQQEPRRANVRCSTWGFPNLILRHQLSRKATKIAHDVVQVHGKGMFDRFGYLPSLDGVASSSSTRGNEKYETRESLKEDIVKALSDLNSRNIGVYGLGGVGKTTLVEDVALIAKQHKLFDKVVIAHVSKNPDFKTIQGEIADLLGLRFDEETIFGRANRLRQRIKMEKSILVILDNIWTMLDLKEVGIPFGNEHNGCKLLMTSRNQDVLVQMDVPKNFTFKLELMSENETWNLFQFMAGDVVKDKNLKDVAFQVAQKCEGLPLRVVTVARAMRNKRDMQSWKEVLRKLQCNDHIEMDGLTYSALELSYNSLESDEMRDLFLLFALIKGENVEYFLKVAMGLNILKYVNTMDEARNKLYTIIRALEETCLLLDVKTGGNILMHDFVCDFATFIACRDKHVFLRKQSNEELPTNAFLNRCMQIVLRQCHIQELPRTIVCPNIKLFFLSSKNRSLKIPDTFFEGLGSLRVLNLTCLNLSSLPTSFRFLPDLKTLCLDFCILENMDAIEGLQNLEILRIWKSSMIKFPREIGRLTQLRMLDLSNSGIEVLPSNILSSLIKLEELYMGNTSINWEDVNSTVQNGNASIAELHKLPNLTALELQIRETWMLPSDIQLMFEKLNLFKIAIGDVWEWADIKDGTLKTLMLKLGTNIHLEHGIKALIKDVENLYLDDVDGIHNVLYQLNGKGFPLLKHLRVQNNANMKHIVDSKERNQIHVSFPILETLVLHNLKNLEHICHGPLSITSFGCLSVIKVKNCVQLKYLFSYTMVKGLSHLSEIEVCDCNYMKEIVIEDINSSANNDTANEKIDFLLLRSLTLEHLETIDDFFSYSSTVSRSKQNYHGLEPDVSAPFFNAQVAFPNLDTLKLSSLLNLNKIWDDNYHSMYNLTSLIVDNCGGLKYLFSSTVVGSFKNLKHLEISNCAMMEEIITKEEGNSASEEVQFCKLEKIILKDMENLKTIWHRQFETSKMLQVKNCNKIVVVFPSSMQKRYNKLEMLEVTNCALVEAIFELSFKESTSVEDTTHLKEVTIDGLPKLKKIWSGNPEEILSFQNLINVKLKFCASLEYLLPLSVATRCSHLKELHIIDCGNMKEIVAEEKESSVNVAPIFELNQLSTLLLWYLGKLKGFYAKKHTVSCPSLNDIDVVHCPKLNLYRPLSTRSSNRQDDNLFVITQEPPFIVEEVIPNLEKLRIDCKEANMILQAQNSSGLFTKMASLRLSSYKNEDIQFPYRFLQNVRSLEYLCVEHSCFKKIFQNVRKDFIGCTKIKRLSLVALPNLEHICEEGFQTDSVLEFLDFLWVYSCSSLINLLPSSVTFTHLVYLGIKDCNGLTKLITSLTAQSLNKLVTLKIEDCASLEEIIIAEENIHITFISLQILMLECLPSLNQFCSSKCFFKFPLLEVVIVRECPRMKVFSEGYTSTPNLQKVKTAENDEEWFWKGNLNDTITSMFEDKVAFRKFKYLALSDYPEMKDLWYSEIEQNVFCNLKHLVVHRCDFLSHVLFPSNVMQVLYGLEELEVRDCDSLEAVFDVKGMKSKDTLVKQRTQLKKLTLSSLPKLKQIWNEDPHEIINFGNLCMVKVSKCQSLLYIFPLSLCEDLVHLEKLVIDSFGVEEIVAMGEGSMEHSFTFPQLNKLRLISLKNLTSFYRGKHSLDLPSLKELEVSRCAFNHLELFSIEKLSRNLEELTINRTDLLEVLNQEHIFEKVQTLYLRYLDETPTTFLNKYSHTIFPNLDTLCVRQSYIGTLFSATSYPRMQISKQIKTLMLSELEMLKHIWQEDFPLDYLLLQDLRELYVRNCPRLISLAPSSTSFTNLTTLVVDSCKKLNYLMTSSTAKSLIQLKILKIMNCKKMSDVVNIDDEKADVVNIDDEKADQEDIIFENLEVMELTSLSSLRSFCNGNQTFIFPSLQSLTVQECPKMEIFSSGVTVAPYLTEIEVVEGTMRWKGDINTTIQHLFLEKLSHNRDYLKINGTDVLEILNQENIFPNVRILDLQYFDETPTTFLNEYCHTMFPNLATFVVHNSSFETLFPSTTGYLSMQISMQIKALTLRELESLKHIWQEDFPLEHPLLKDLHELYVFNCPSLISLVPSSTSFTNLTCLMVFDCKELVYLITSSTAKSLILLRTLKISNCEKMSDVVKIDDEKADQEDIIFQNLEAMEFLSLSSLGSFCNGNQTFIFPSLLWLTVKECPQMEIFSSGVTVAPCLRGIKVAEETLRWKDDINTTIQHFFQEKKAQRSNALNETIISSHLQGHIMRSDSDSEE* 2334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2475 2333 SMART AAA_5 172 308 IPR003593 -
Tpr1g2475 2333 Coils Coil 2333 2333 - -
Tpr1g2475 2333 Gene3D - 308 396 IPR042197 -
Tpr1g2475 2333 Coils Coil 68 88 - -
Tpr1g2475 2333 Pfam NB-ARC domain 158 392 IPR002182 GO:0043531
Tpr1g2475 2333 Gene3D Ribonuclease Inhibitor 1690 2011 IPR032675 -
Tpr1g2475 2333 Gene3D Ribonuclease Inhibitor 500 911 IPR032675 -
Tpr1g2475 2333 Gene3D Ribonuclease Inhibitor 984 1228 IPR032675 -
Tpr1g2475 2333 CDD AAA 157 308 - -
Tpr1g2475 2333 SUPERFAMILY L domain-like 465 865 - -
Tpr1g2475 2333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 406 IPR027417 -
Tpr1g2475 2333 Coils Coil 1748 1768 - -
Tpr1g2475 2333 PRINTS Disease resistance protein signature 175 190 - -
Tpr1g2475 2333 PRINTS Disease resistance protein signature 248 262 - -
Tpr1g2475 2333 PRINTS Disease resistance protein signature 342 356 - -
Tpr1g2475 2333 PRINTS Disease resistance protein signature 986 1002 - -
Tpr1g2475 2333 PANTHER - 1644 1747 - -
Tpr1g2475 2333 PANTHER - 20 1107 - -
Tpr1g2475 2333 PANTHER - 2148 2295 - -
Tpr1g2475 2333 PANTHER - 1352 1519 - -
Tpr1g2475 2333 PANTHER - 1522 1612 - -
Tpr1g2475 2333 PANTHER - 1870 2023 - -
Tpr1g2475 2333 PANTHER - 1126 1228 - -
Tpr1g2475 2333 PANTHER RPP4C3 1870 2023 - -
Tpr1g2475 2333 PANTHER RPP4C3 1522 1612 - -
Tpr1g2475 2333 PANTHER RPP4C3 1352 1519 - -
Tpr1g2475 2333 PANTHER RPP4C3 2148 2295 - -
Tpr1g2475 2333 PANTHER RPP4C3 1644 1747 - -
Tpr1g2475 2333 PANTHER RPP4C3 1126 1228 - -
Tpr1g2475 2333 PANTHER RPP4C3 20 1107 - -
Tpr1g2475 2333 Gene3D - 141 302 IPR027417 -
Tpr1g2475 2333 SUPERFAMILY L domain-like 901 1233 - -
Tpr1g2475 2333 SMART LRR_typ_2 546 568 IPR003591 -
Tpr1g2475 2333 SMART LRR_typ_2 614 637 IPR003591 -
Tpr1g2475 2333 SMART LRR_typ_2 1727 1750 IPR003591 -
Tpr1g2475 2333 SUPERFAMILY RNI-like 2042 2263 - -
Tpr1g2475 2333 SUPERFAMILY L domain-like 1548 1897 - -
Tpr1g2475 2333 Gene3D Ribonuclease Inhibitor 1234 1512 IPR032675 -
Tpr1g2475 2333 Gene3D Ribonuclease Inhibitor 1513 1682 IPR032675 -
Tpr1g2475 2333 Gene3D Ribonuclease Inhibitor 2022 2210 IPR032675 -
Tpr1g2475 2333 SUPERFAMILY RNI-like 1369 1635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2475 Tpr-Chr1 27933819 27956712 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2475 171 569 WRKY Transcription Factor Family AT5G45050 24.228 3.33e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2475 - - mtr:MTR_2g089975 2543.84