Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2464 ATGAGTTGGAGAGAAGCGCTTCCAGAGGCTCCTGACCTCGCAGGAGGATTTGTAGTTCTAAATTCAAGGAATGGAAGTGAGGAAGTCAAGGATATTGTTGAAAATGCTACATGTTTGTTTGACATGACAGACTTGTACATTGTCGATGATCCTGTTGGAATCAAATCTCGAATACGAGATATGATTCAACGGCTAAACATCCAACAATCAAATGATATCATGCCACTAGGTTTGTGGGGCATGGGCGGAATTGGTAAAACCACAATCGCGAAAGCGATTAATGATAAACAGATGAAAGTGAATGAATTGAGCTTTTTAGTTGGCATGCATAGTACAATTGTCGCTAGCTCAAAAATATTCCTAAAGATCAAGTACAACAAAAATGATAGGAACAAACTTGGAATGCATGATTTGATTTGTTACGAGACATGGGAACAAACTTTTGGTGATTTCTCTATGTCCTCAGTTCATTCTCCATTCAAAATGAAACTATGA 495 0.3818 MSWREALPEAPDLAGGFVVLNSRNGSEEVKDIVENATCLFDMTDLYIVDDPVGIKSRIRDMIQRLNIQQSNDIMPLGLWGMGGIGKTTIAKAINDKQMKVNELSFLVGMHSTIVASSKIFLKIKYNKNDRNKLGMHDLICYETWEQTFGDFSMSSVHSPFKMKL* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2464 164 Gene3D - 47 139 IPR027417 -
Tpr1g2464 164 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 121 IPR027417 -
Tpr1g2464 164 Pfam NB-ARC domain 57 104 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2464 Tpr-Chr1 27740202 27742980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2464 52 96 WRKY Transcription Factor Family AT5G45050 46.667 3.47e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2464 - - lja:Lj0g3v0045059.1 126.716