Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2454 ATGGAAAACCAAATCGATTGGGATTTTTTCTTCGATCAGTTACCAGACTTTGAACAAGTCGCCGATTTTTTACAGGAGGATGTAATCAATCCACCTGTTTCCATCGGAGATACTCCGTCGCCAATTCCCGCGTTATCACAGATTGAGAATTTGCTCATGACTGATTCCGATGAGGGAATTGCGTCGCCCGAGGAGTCGGACTATGATAAGCTTCTGGCGGAGATTCTCATTGAACCGCTCCCTGAATCCGAGGAAGGTTCGGTCTCGGTGGTTCCTTCTGATAAAGGCGGAGTTGATCCATCGACTCCTGAAGAGGTTCGTTCTGATAAAGACGGAGTTGATCCATCGACTCCTGAAGAGGTTTCTCCTGAACCTGTGTCGAAGAAGCAAATAAGGCAGATGAGGAACAGGGATGCTGCTGTGAAATCAAGAGAGAGGAAGAAGACGTATGTGAAAAACCTTGAGACGAAGAGTAGATATTTTGAAGGGGAATGCAGAAGATTGGAGCATTTGCTCCAGTGCTGCTATGCTGAGAACCATGCTTTGCGGTTTTGTTTGCAATCGCGTAGTGCATTTGGTGCTCCCATGACCATGCAGGAGTCTGCCGTACTCTTGTTGGAATCCCTGCTGCTGGGTTCCCTGCTATGGTTCATGGGCATCATGTGGCAACTCAGTCTACCCCTACTGTGGCTAACAGTGTCACCTCCAAGAGAAAACACGGAACACAAAAGTCTAAGAAGGGTGACTCTAAAAGGGCCAAACAGTAATATCTCTGAATATTTCCTGACTCAATCGTTTGTAAAAAGTAGAAGATGCCAAGCTTCAAGAACAAAGATGAAATTTGATTTTATCGTGTTCTAA 861 0.4564 MENQIDWDFFFDQLPDFEQVADFLQEDVINPPVSIGDTPSPIPALSQIENLLMTDSDEGIASPEESDYDKLLAEILIEPLPESEEGSVSVVPSDKGGVDPSTPEEVRSDKDGVDPSTPEEVSPEPVSKKQIRQMRNRDAAVKSRERKKTYVKNLETKSRYFEGECRRLEHLLQCCYAENHALRFCLQSRSAFGAPMTMQESAVLLLESLLLGSLLWFMGIMWQLSLPLLWLTVSPPRENTEHKSLRRVTLKGPNSNISEYFLTQSFVKSRRCQASRTKMKFDFIVF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2454 286 MobiDBLite consensus disorder prediction 83 139 - -
Tpr1g2454 286 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 126 169 IPR004827 GO:0003700|GO:0006355
Tpr1g2454 286 MobiDBLite consensus disorder prediction 100 117 - -
Tpr1g2454 286 Pfam bZIP transcription factor 127 170 IPR004827 GO:0003700|GO:0006355
Tpr1g2454 286 PANTHER BZIP TRANSCRIPTION FACTOR 60 1 285 - -
Tpr1g2454 286 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 1 285 - -
Tpr1g2454 286 Gene3D - 127 188 - -
Tpr1g2454 286 SMART brlzneu 124 188 IPR004827 GO:0003700|GO:0006355
Tpr1g2454 286 CDD bZIP_HY5-like 129 180 - -
Tpr1g2454 286 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 132 146 IPR004827 GO:0003700|GO:0006355
Tpr1g2454 286 SUPERFAMILY Leucine zipper domain 128 186 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2454 40 286 bZIP Transcription Factor Family AT1G42990 36.059 1.95e-16 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr1g2454 bZIP_1 6.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2454 - - pvu:PHAVU_007G247600g 271.552