Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2443 ATGTACGGCGGTGGTCACCGTGAACGCGAATCTGAATCTGACACCACGAGAATGCACAGCGATGAAGATGATGAAGATGAAAACGATGAAGGTTCGTTCAAAAGCTGGGCAAAGCAAACAGAAGAAAGCTATCAGTTGCAGCTTGCACTGGCGCTTCGCATTTCATCTCATTCAGCTTCTTCCGCTCAATCTAATTACTTGTTGGATTTTGAACCTTCTTCTTCTTCTTCTTCTTCTGATTCTCCTCAATCACTTTCACACCGTTTTTGGGTAAATGGTTGTTTGCAATACTCTGACAAAGTTCTAGATGGCTTTTACATAATCCATGGGATGGATCCATATACATGGACTATAAGTACCGATATGCAAAATGTTGGTATGATTCCATCATTTGAATCACTGATGTCTGTTAAACCATGTGATAACTCGTCAGTTGTAGTTGTTGCTATTGACAAATCTAGAGACCCTGGTTTGAGAGAACTGCAAAGTAGGGTGTTAAGTCTTTCAAGTAACTGGATTACTATCAAAGATGCAACTGATCAGCTTGCAAATCTTGTTTATAGTAGGATGGGGGGAGGATCTTCCGACGAGGAAAATTTAGGTATACGCTGGAAGGAATGCTCTGAAATACTTAAAAGCTGTCTACAATGTATCATTCTTCCAATTGGAAGCTTACCAGTTGGCCTTTGTGTTCATCGAGCATTGCTGTTTAAAGTGTTAGCAGATTTAATTAACCTACCGTGTCGAATTGCTAAGGGCTGCAAGTATTGTAGAAAGGACATGGGTGCTTCTTGTTTAGTACAATTTGGTTCTGACAGGGAGTATATGATTGATTTAGTAGGAAGGCCTGGGGAAACATGTCCACCCGATTCTTCAGTGAATTCTGCATCTTCGATGTTGATCCCTTCACCATTATGTCATCCAAGGTTCAAGCCAGTTGAAACAGCTGAATATACAAAGACAATGGCCCAATTGTATTTCTTGGACAACCAAGCACTGCATCTTGTATTTGATACCAAATCAGGAGGTACTATTGATTGTAGTGACAAAATGGATCTACAGCAAACTGAAATGTTTGGCACAAACTATGCTAGTGGGAACAACCAGATAGTTGCTTTGAGTCCTGGTACAGAGGAACATGTGTCTTTCAATGAAGCAAACCAGTCAGTAGTGAATTATTCAAGTCATGCAGTTGACCTTGAGGAGGAAGATCTGGACATTCCGTGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTCCTTCGTGCAGACTGGCGTGGCTCTGATGTTGCTGTGAAGATACTTAAGGTGCAGGGTTTTGATTCTGAACGATTTGAAGAGTTTCTAAAGGAGGTCACACTCATGAAGCGCCTACGTCATCCAAACATTGTACTTCTAATGGGTGCCGTTGTCCAACCACCAAAGTTATCAATAGTAACAGAATATTTATCAAGAGGAAGCTTGTATGAACTTCTGCAGATGCCAACTGTTGGACCCTCAATCAGTGAGAAGCGTCGTTTAAGTATGGCTTATGACGTGGCAAGTGGAATGAATTATCTTCATCAAATGAAACCTCCCATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTTGACGATTCATACACTGTTAAGGTATGTGACTTTGGCCTTTCACGTACAAAATCAAATACATATCTTTCATCTAGAACAGCTGCTGGAACGCCTGAATGGATGGCACCAGAAGTCATCCGAGGTGAACCATCAAATGAAAAATGTGATGTATTTAGCTTTGGTGTAATCTTGTGGGAATTGGTGACCCTTCAACAACCATGGAGGGAATTAAATCCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGGCAAAAGGCTAGACATTCCGAGGCATGTGAATCCTCAAGTGGCTGCCTTGATTGAGCTCTGCTGGTCTACGGAACAAAAGAGGCGGCCTTCTTTTTCCTACATTATGAAATGTTTGCAGCAAATAATTGCTGATGCTGAAGTGTGA 2028 0.4137 MYGGGHRERESESDTTRMHSDEDDEDENDEGSFKSWAKQTEESYQLQLALALRISSHSASSAQSNYLLDFEPSSSSSSSDSPQSLSHRFWVNGCLQYSDKVLDGFYIIHGMDPYTWTISTDMQNVGMIPSFESLMSVKPCDNSSVVVVAIDKSRDPGLRELQSRVLSLSSNWITIKDATDQLANLVYSRMGGGSSDEENLGIRWKECSEILKSCLQCIILPIGSLPVGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDMGASCLVQFGSDREYMIDLVGRPGETCPPDSSVNSASSMLIPSPLCHPRFKPVETAEYTKTMAQLYFLDNQALHLVFDTKSGGTIDCSDKMDLQQTEMFGTNYASGNNQIVALSPGTEEHVSFNEANQSVVNYSSHAVDLEEEDLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDSERFEEFLKEVTLMKRLRHPNIVLLMGAVVQPPKLSIVTEYLSRGSLYELLQMPTVGPSISEKRRLSMAYDVASGMNYLHQMKPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKSNTYLSSRTAAGTPEWMAPEVIRGEPSNEKCDVFSFGVILWELVTLQQPWRELNPSQVVAAVGFMGKRLDIPRHVNPQVAALIELCWSTEQKRRPSFSYIMKCLQQIIADAEV* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2443 675 Gene3D Transferase(Phosphotransferase) domain 1 491 674 - -
Tpr1g2443 675 PRINTS Tyrosine kinase catalytic domain signature 486 499 IPR001245 GO:0004672|GO:0006468
Tpr1g2443 675 PRINTS Tyrosine kinase catalytic domain signature 527 545 IPR001245 GO:0004672|GO:0006468
Tpr1g2443 675 PRINTS Tyrosine kinase catalytic domain signature 574 584 IPR001245 GO:0004672|GO:0006468
Tpr1g2443 675 PRINTS Tyrosine kinase catalytic domain signature 593 615 IPR001245 GO:0004672|GO:0006468
Tpr1g2443 675 PRINTS Tyrosine kinase catalytic domain signature 637 659 IPR001245 GO:0004672|GO:0006468
Tpr1g2443 675 ProSiteProfiles Protein kinase domain profile. 412 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2443 675 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 385 673 - -
Tpr1g2443 675 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 354 - -
Tpr1g2443 675 ProSitePatterns Protein kinases ATP-binding region signature. 418 439 IPR017441 GO:0005524
Tpr1g2443 675 Pfam Ethylene-responsive protein kinase Le-CTR1 83 285 - -
Tpr1g2443 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Tpr1g2443 675 MobiDBLite consensus disorder prediction 1 38 - -
Tpr1g2443 675 SMART serkin_6 412 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2443 675 MobiDBLite consensus disorder prediction 1 18 - -
Tpr1g2443 675 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 385 673 - -
Tpr1g2443 675 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 25 354 - -
Tpr1g2443 675 Gene3D Phosphorylase Kinase; domain 1 405 490 - -
Tpr1g2443 675 Pfam Protein tyrosine and serine/threonine kinase 413 666 IPR001245 GO:0004672|GO:0006468
Tpr1g2443 675 CDD STKc_MAP3K-like 418 664 - -
Tpr1g2443 675 SUPERFAMILY Protein kinase-like (PK-like) 390 666 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2443 Tpr-Chr1 27513961 27526543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2443 36 673 MAP Kinase Kinase Kinase AT5G03730 56.672 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tpr1g2443 PK_Tyr_Ser-Thr 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2443 K14510 - gmx:100807496 1095.88