Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2410 ATGGATTATCTAATTTCTACTGTTGAAAAAGTTTCTGGTTATGCCTTTGAGCTTATTAGACGTCAAGCAAGTTACTTAATATTTTATAAACGCAATTTCGATACGTTAGAGACTAATGTTGAAGGCCTTAAGAATGAACGAGAAAGAATCCTCCATTTGATTGATGAAGAAAGGCGAAATGGTAAACTAATCGAGAGAGATGTGGAGAACTGGTTGGAGAAAGTGAACGAGGTTATTGAAAGGGCAAATAAACTTCAAAATGATCCTCGTCGTGCCAATGTCAGGTGCTTTACCAATTTGATTTTGCGTCATAAACTAAGTAGAAATGCCACAAAAATTGATAAAGATGTTCAAGCTCAAGAAAAAGGGAAGTTTGATCGAGTTGGTTACCGTCCCCCCTTAGATGATGACATAGCAGCCACCTCTTCTTCTACAGAAGATTGTGAAAACTACGAGACAAGGAAGTCACTTAAGAATGATATTGTGAAAGCTCTAGGAGATCTTAGTTCATGCAACATTGGGGTCTATGGTTTGGGTGGGGTGGGTAAGACCACTCTGGTTGAAGAACTTATTAAGCTAATAGCAAACCAACATAAGTTGTTCCATAAAGTGGTTATAACACATGTATCCAAAAATCCAGACATTAAAACAATTCAAGGGGAGATTGCGGATTTGTTGGGTTTACAATTTAATGAGGAGACTATTCTTGGCAGAGCACATCGCCTAAGACAAAGAATTAAGATGGAGAAAAGTATCCTTGTCATTCTAGATGATATATGGACCGTGCTTGATTTGAAGAAAGTGGGAATCCCATTTGGTAATGAACATAATGGATGCAAATTATTGATGACATGTAGAAATCAAGATGTTTTGCTACAAATGGATGTTCCAAAGGATTTCACTTTTAAACTTGAACTTATGAGTGAAAACGAGACATGGAGCTTGTTTCAGCTTGAGGTTGGGGATGTGATTAAAGATCACAATTTGAAAGATACAGCATATCAAATTGCCCAAAAATGTGAAGGTTTACCTCTTATGGTAGTGACAGTGGCACGTGCAATGAGAAATAAGAGGGATGTCCAATCTTGGGAATATGCATTAACAAAATTACAAAGTAATGATGATAATAATGATGGTATAGGGATGGAACCAAAGACTTATTCTGCTTTGGAACTAAGTTATGAATCATTGGAAAGTGATGAAATGAGGGATCTCTTCTTACTTTTTGCATTACTATTAGGTAATGATGCAAAGTACTTTCTGCAACTTGCAAAGGGTTTAGGCATGTTAAAGCATTCTAATACCATGGCTGATGCAAGAAATAAACTTCACACAATAATCAAATCTTTGGAGGCGACTTGTTTGCTTGAAGTTAAAACAGGAGGAAAGATCCAAATGCACGACTTCGTTCGTGATTTTGCTACCTCTAAAGCACGCAGGGACAAACATGTATTTATAAGAAAACAATCAAATGATGATTGGGCAACCAAGGATTTTTTAAAAAGGTGCACGCAGATGGTCGTAGATACCATTCCTACCGACATGTTTCCTCAAACGTTTGATTGCCCAAACATCAAGTTTTTCTGTTTGACATGTTTGAACCGTTCTTTAGAAGTCCCTGATAATTTTTTTGAGCATATGGGAAGCCTTACGGTGCTAGATTTAACACGCTTTAACTTTTCTTCATTACCCATCTCATTTTGGTTCCTAACAAACCTTCAAACATTGTGTTTGGATTCTTGCATTTTGGAAAATATGGATGCTATAGAAGGTTTAAAAAATTTACAAATTCTTCGCATCTGGAAATCTTCAATGATTAAGTTGCCAAGTGCAATAGGGAAATTAACTCAATTGAGAATGCTTGATTTGAGTGATTCAGGAATAGAAGTATTCCCATCCAACATCTTATCTAGCTTGATTAAACTAGAAGAGTTGTACATGGGCAATACCTCTATTAATTGGGAAGATGTGAATTCAATGGTTAAAAATGAAAAAGTTAGCATTGCTGAACTTCATAAACTACCCAACTTAACTTCTCTAGAATTACAAATTCGTGAGACTTGCATGTTGCCAAGGAACATGCGATTGATGTTTGAGAAGCTGAAACGCTTTAAAATAGCTATTGGAGATGTATGGGAATGGGCTGACATTAAGGATGAAACCTTAAAAACATTGATGCTCAAACTTGATACTAACATACATTTGCAGTACGAAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTACTTGGATGATGTTGATGGAATTCAAAATTTGCTTTATAACCTAAGTGCGGACGGATTTCCTTTGCTGAAACATCTCCTCGTCCAAAATAATGCAAACATGAAGCACATTGTTAACTCAAAAGAGAGAAATCAAATCCATGTGTCCTTTCCCATCTTGGAAACACTAGTACTTCACAATCTTAAAAACTTGGAGCATATATGTCATGGTCCACTTTCAATTACTTCTTTTGGAAGTCTTAGTGTTATCAAAGTCAAAAATTGTGTCCAATTGAAATATCTTTTCTCCTTTACAATGGCTAAAGGACTTCCCAAACTTTCTAAGATTGAAGTTTTTCATTGCAATTCGATGAAAGAGATAGTGCTCGGAGACAACAATTCAAGTGCAAATAATGATATAACCAACGAAAAAATTGAGTTTCCTCTATTATGTTCTTTGACTTTAGAATATTTGGAGACACTTGATAATTTCTTCTCTTGTTATTTGACACATTCCAAAACTAAGCAAAATCATCAAGGCTTGGAGCCTTATGTTTCTACACCATTTTTCAATGCCCAGGTTGCTTTTCCTAATTTGCATACTCTTAAATTGAGCTCACTTCTCAATTTGAGTAAAATTTGGGATGACAACAATCATTCTATGTACAACTTGACTAGTTTGATTGTGGATAATTGTGTTGGATTGAAATACTTATTCTCCTCCTCTTTAGTTGCAAGTTTTAAGAACCTCACAAACCTTGAAATAAGTAATTGTCCTGTGATGGAGGAGATAATATCTAAAGATGAGAGGGACATTGCATTGAAAGAGGTTCATTTTTGCAAATTAGAGAAAATCATATTGAAGAGCATGGACAAGTTGAAGACAATATGGCACCATGAATTTGAAACATTGAAGATGTTGCAAGTGAACAAGTGTAGTAAGATTGTGGTGGTTTTTCCCTCTTCAATGCAAAAATCATATAATAAGCTAGAGATGTTGGAGGTTACAGATTGTGGTTTAGTGGAAGAAATATTTGAATTGATCCGCTTCAAAGAAAGTAGCAGCATAGAAGAAGATACAACAACCCATTTAAAAGAAATTAGTATAGATGAATTGCCAAAGCTAAAAAAGATATGGAGTGTGGATCCTCAAGGAATTCTTAGTTTTCAAAATCTAATGAATGTACAAGTAAATAGTTGTGCTAGCTTGGAATATCTATTACCACTTTCAGTAGCCATTCATTGTTCACTTCTCAGCAAACTTGATATAAAATATTGTGGAAACATGAAGGAAATTGTTGCGGAGGAGAAAGAATCTAGCAGCGTGAATGCATCTCCTATATTTGAGTTTAATCAACTGAGTACTTTAATACTTTGCAACTTATTTAGACTCAAGGGTTTCTTTGCTAAAAACCATACCCTAGCATGTCCATCATTGAATATAATTGATGTTTACAGTTGTCCAAAGTTGATCTTGTATAGAACTCTGTCTACAAGAAGCTCCAAAAATATTCGAGATGACAAAGTCTCTGTTTCAACGCAACAACCACTTTTCATTGTCGAAGAGGTGATTCCAAATTTGGAGGAATGGACAATAGATGGTGAGGAAGCTAACATGATATTGCAAGTCCAAAATTCAAGTGGCCTATTCACAAAAATAACATCTCTTGAGTTGTGTTATTTTAGGAATGACGATACAGTATTATTTCATCATTCCTTACTTGAAAATGTGCCCAATCTTGAGTCACTATTTGTTACACAATGTTACTTCAAGAAGATATTCCAAGATGAAGGGAGGACTCACACACAAATCAAAGTGTTGTCATTAAGTTCATTACCTAACCTCGAACATATTTGCAAGGGAGGATCCCAAATTGAGTTCCTTCAATTCTTATGGGTTAACAACTGTTCTAGTTTGATAAATTTATTGCCCTACTCTGCCACCTTCAGTCATCTGGTACATATGGAGATAATATGTTGCAATGGGTTAAAATATTTATTGACATCTCCAACAACGACTCAAAGTTTGGTCAAACTCTCCACACTGAAGATAAAAGAATGTAATTCACTTGAAGAAATAATAGTTACTGGAGGAGAGGAAAACATTCACATTACATTTATTAGTTTAAAAATATTGATGTTGGAATGTTTGCCTAGCCTCAACAGATTTGGCTCTAGTAAGTGCTTCTTCAAATTTCCGTTGCTGGAAGTAGTAGTTGTGAGAGAATGTCCTCGCATGAATGTTTTTTCTGAAGGATATACAAGTACACCATATCTTCAAAAAGTTCAAATTGCAGAAAATGATCAACAGTGGTTTTGGAGGGGAAACCTAAATGATACAATAAGCAACATGTTTGAAGATAAGGTTGCATTTTCTATGTTCAAATATTTGGCCTTATCCGACTACCCTGAGTTGAAGGATTTGTGGTATGGTGAACTCGATCGAAATGTATTTTGCAATTTGAAACATCTAGTGGTGAAGAAATGTGATTTTTTATCACATGTACTTTTTCCATCAAATGTAATGCAAGTGCTGTATGGATTGGAAGAACTTGAAGTAACAGATTGTGATTCATTAGAAGCTGTGTTTGATGTGGAAGGTATGAAGTCTAAAGACACATTGGTAAAAAAACAAAGCACCCAATTGAAAAAATTGACTTTGTCTAGTTTACCAAAATTGAAGCACATATGGAATGAGGATCCTCATGAAATTATAAACTTTGGAAACTTATGCACGCTGAAAGTTTCTACTTGCCAAAGTTTGTCATATATATTTTCATTGCCACTGTGTGAAGATCTTCAACATCTTGAAATGCTTCAGATAGAGCTTTGTGAAATTGAGCAAATTGTAGCAATGGAAGAAGGATCAATGGTACATAGCTTTAATTTTCCTAAATTGATTGAATTGAAACTGTTTAATTTGACAAAGCTTACGAGCTTCTATCGTGGAAAGTATACTTTAGACTGCCCTTCATTAAAGGATTTGGATGTATTTCGCTGTGGTGCCTTCAACCATTTGGACTTGTTTTCTATTGAAAAGTTGAGTCGTAACTTGGAGAAATTGACAATAAATGACACAAATTTGTTGGAGATTTCGAATCAAGAAAATATCTTTCAAAAAGTTGAAATTCTTACTTTAGAATATTGCTTGGATGTAACTCCTACAAATTTTCTGAATGAATATTCTCACTCAATTTTTCCTAATCTTGATACATTGAAAGTGTATCTGAGTTCTTTTGAAACATTGTTCCCCACTACTACGAGTTATCTCAGTATGCAAATTTTAAAGCAAAATAAGAAGACTTTCCATTGGACCATCCTCTGTTACAAGATCTGCATGAATTATTTGTAA 5577 0.348 MDYLISTVEKVSGYAFELIRRQASYLIFYKRNFDTLETNVEGLKNERERILHLIDEERRNGKLIERDVENWLEKVNEVIERANKLQNDPRRANVRCFTNLILRHKLSRNATKIDKDVQAQEKGKFDRVGYRPPLDDDIAATSSSTEDCENYETRKSLKNDIVKALGDLSSCNIGVYGLGGVGKTTLVEELIKLIANQHKLFHKVVITHVSKNPDIKTIQGEIADLLGLQFNEETILGRAHRLRQRIKMEKSILVILDDIWTVLDLKKVGIPFGNEHNGCKLLMTCRNQDVLLQMDVPKDFTFKLELMSENETWSLFQLEVGDVIKDHNLKDTAYQIAQKCEGLPLMVVTVARAMRNKRDVQSWEYALTKLQSNDDNNDGIGMEPKTYSALELSYESLESDEMRDLFLLFALLLGNDAKYFLQLAKGLGMLKHSNTMADARNKLHTIIKSLEATCLLEVKTGGKIQMHDFVRDFATSKARRDKHVFIRKQSNDDWATKDFLKRCTQMVVDTIPTDMFPQTFDCPNIKFFCLTCLNRSLEVPDNFFEHMGSLTVLDLTRFNFSSLPISFWFLTNLQTLCLDSCILENMDAIEGLKNLQILRIWKSSMIKLPSAIGKLTQLRMLDLSDSGIEVFPSNILSSLIKLEELYMGNTSINWEDVNSMVKNEKVSIAELHKLPNLTSLELQIRETCMLPRNMRLMFEKLKRFKIAIGDVWEWADIKDETLKTLMLKLDTNIHLQYEIKALIKGVENLYLDDVDGIQNLLYNLSADGFPLLKHLLVQNNANMKHIVNSKERNQIHVSFPILETLVLHNLKNLEHICHGPLSITSFGSLSVIKVKNCVQLKYLFSFTMAKGLPKLSKIEVFHCNSMKEIVLGDNNSSANNDITNEKIEFPLLCSLTLEYLETLDNFFSCYLTHSKTKQNHQGLEPYVSTPFFNAQVAFPNLHTLKLSSLLNLSKIWDDNNHSMYNLTSLIVDNCVGLKYLFSSSLVASFKNLTNLEISNCPVMEEIISKDERDIALKEVHFCKLEKIILKSMDKLKTIWHHEFETLKMLQVNKCSKIVVVFPSSMQKSYNKLEMLEVTDCGLVEEIFELIRFKESSSIEEDTTTHLKEISIDELPKLKKIWSVDPQGILSFQNLMNVQVNSCASLEYLLPLSVAIHCSLLSKLDIKYCGNMKEIVAEEKESSSVNASPIFEFNQLSTLILCNLFRLKGFFAKNHTLACPSLNIIDVYSCPKLILYRTLSTRSSKNIRDDKVSVSTQQPLFIVEEVIPNLEEWTIDGEEANMILQVQNSSGLFTKITSLELCYFRNDDTVLFHHSLLENVPNLESLFVTQCYFKKIFQDEGRTHTQIKVLSLSSLPNLEHICKGGSQIEFLQFLWVNNCSSLINLLPYSATFSHLVHMEIICCNGLKYLLTSPTTTQSLVKLSTLKIKECNSLEEIIVTGGEENIHITFISLKILMLECLPSLNRFGSSKCFFKFPLLEVVVVRECPRMNVFSEGYTSTPYLQKVQIAENDQQWFWRGNLNDTISNMFEDKVAFSMFKYLALSDYPELKDLWYGELDRNVFCNLKHLVVKKCDFLSHVLFPSNVMQVLYGLEELEVTDCDSLEAVFDVEGMKSKDTLVKKQSTQLKKLTLSSLPKLKHIWNEDPHEIINFGNLCTLKVSTCQSLSYIFSLPLCEDLQHLEMLQIELCEIEQIVAMEEGSMVHSFNFPKLIELKLFNLTKLTSFYRGKYTLDCPSLKDLDVFRCGAFNHLDLFSIEKLSRNLEKLTINDTNLLEISNQENIFQKVEILTLEYCLDVTPTNFLNEYSHSIFPNLDTLKVYLSSFETLFPTTTSYLSMQILKQNKKTFHWTILCYKICMNYL* 1859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2410 1858 Gene3D - 136 299 IPR027417 -
Tpr1g2410 1858 SMART AAA_5 169 306 IPR003593 -
Tpr1g2410 1858 Gene3D Ribonuclease Inhibitor 1532 1838 IPR032675 -
Tpr1g2410 1858 SUPERFAMILY L domain-like 465 902 - -
Tpr1g2410 1858 Coils Coil 68 88 - -
Tpr1g2410 1858 PANTHER - 1159 1332 - -
Tpr1g2410 1858 PANTHER - 1130 1232 - -
Tpr1g2410 1858 PANTHER - 1372 1522 - -
Tpr1g2410 1858 PANTHER - 1527 1616 - -
Tpr1g2410 1858 PANTHER - 1648 1742 - -
Tpr1g2410 1858 PANTHER - 1100 1153 - -
Tpr1g2410 1858 PANTHER - 1017 1093 - -
Tpr1g2410 1858 PANTHER - 22 1010 - -
Tpr1g2410 1858 Coils Coil 26 60 - -
Tpr1g2410 1858 PRINTS Disease resistance protein signature 172 187 - -
Tpr1g2410 1858 PRINTS Disease resistance protein signature 246 260 - -
Tpr1g2410 1858 PRINTS Disease resistance protein signature 340 354 - -
Tpr1g2410 1858 PRINTS Disease resistance protein signature 613 629 - -
Tpr1g2410 1858 Pfam NB-ARC domain 160 395 IPR002182 GO:0043531
Tpr1g2410 1858 PANTHER RPP4C3 1017 1093 - -
Tpr1g2410 1858 PANTHER RPP4C3 1372 1522 - -
Tpr1g2410 1858 PANTHER RPP4C3 1130 1232 - -
Tpr1g2410 1858 PANTHER RPP4C3 1100 1153 - -
Tpr1g2410 1858 PANTHER RPP4C3 22 1010 - -
Tpr1g2410 1858 PANTHER RPP4C3 1527 1616 - -
Tpr1g2410 1858 PANTHER RPP4C3 1159 1332 - -
Tpr1g2410 1858 PANTHER RPP4C3 1648 1742 - -
Tpr1g2410 1858 SUPERFAMILY RNI-like 1118 1439 - -
Tpr1g2410 1858 Gene3D Ribonuclease Inhibitor 1386 1514 IPR032675 -
Tpr1g2410 1858 Gene3D - 306 398 IPR042197 -
Tpr1g2410 1858 SUPERFAMILY L domain-like 1515 1843 - -
Tpr1g2410 1858 Gene3D Ribonuclease Inhibitor 495 880 IPR032675 -
Tpr1g2410 1858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 408 IPR027417 -
Tpr1g2410 1858 SUPERFAMILY L domain-like 938 1085 - -
Tpr1g2410 1858 Gene3D Ribonuclease Inhibitor 928 1385 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2410 Tpr-Chr1 27175423 27187656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2410 173 632 WRKY Transcription Factor Family AT5G45050 21.905 8.44e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2410 - - mtr:MTR_2g089975 2180.6