Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2384 ATGTGCATGATTATTGTAGGATTTATAGCCATCTTCATCCTCTTCTTCATATACATCCACTACTGGAGATGCAATAGAGATGAAATTGTTCCGAATTGGCCAGTAATAGGTATGGTACCGACGTTTGTGCGTCATGTGTCCGATTTTAATGATTTTGCAACCTTAGTTCTTAAGCGTCATGGAGGAACCTTTCGATTTCAAGGGCCCTGGTTCACAAACACAAGCTTTATAATTACCACTGATCCAACCAACGTCGACCACATCTCCAGTAAGAATTTCGGTAACTACGGGAAAGGATCAAACTTCCAAGAAATATTTGATTTTTTTGGAGATGGTATTATAAATTCTGATTCCCATGATTGGAAACAGAAGAGGACAATGTACCATTTAATTCTCAAAGGGAAGAGCTTCAAGAAAATGTTGAGTCAAATCATTCAGAAAAAAGTTGAGAATTGCTTACTACCATTTCTTAAAGATGTATGTGAAGAAGGTGTTCATGTGGACTTGCAAGATGCCTTGAATAGGTTCACTTTTGACACTAACTGCACCATTGTGTTTGGATTTGATCCTAACACTCTTCCGAACAAGTTTGGTGAGCTTAGAGAAATTGCTTATCAAAAATCACTTCCTGTGATAGAGGAAGTAATATTCTACAGACACTTCATTCCAAGTTTTCTATCGAGGCTGCAGAAATGGATCCATGTTGGTCAAGAAAAGAAGTTAAAGATAGCCGGAGAAAATCTTGACAGATTCTTGTATGAAAGTATAACATTTTCCAAACAAGAGCAAAGCAAGTGCAGTGAAAAAATTGATGAATGTTATTTTGATTTGGTAAAAGCACTTCAGAAAGAAGGATATGGAGAGGGGAAAATGGGTGAGAAGTATCTTAGAGACATTATACTTAATCTCCTGATAGCAGGAAATGGCACAATAAGTTCAGGTCTCAGTTGGTTTTTCTGGCTTGTTTCAACTCATCCTATTGTAGAAGCCAAAATTATTCAAGAGATTAAAGATAATTGTATCACTCAAAATGAGAATTGGAGTATATCAAGGGTGGAAGACCTTGATAAGCTAGTTTATCTCCATGGAGCTATATGTGAAGCCTTGAGGCTTTATCCTCCTATACCTTTTGAGCATATGTGCGCGATCAAATCTGATATACTACCTAGCGGAGACCGCGTTAGTCAAAATACAAAGGTAATGTACTCTCTGTATGAAATGGGAAGGATGGAACAAATATGGGGAGAAGACTGCATGAAATTTAAGCCTGAGAGATGGGTATCAGAGACAAGACACATTATACATGTACCATCTTACAAGTTCATAGCTTTCAATACAGGTCCTCGAAGTTGTTTAGGTAAAGATATTAGCTTCTTTCAAATGAAGATGGTTGCAGCTAGTATATTATCGAAGTTTCACATACAAGTGGTTGAAGGTCACCCCGTAACTCCAAAGCTTTCGATTGTTCTTCGCATGAAACATGGCTTGAAGGTCAAACCCACTAAAAGATGCATTTGA 1518 0.3755 MCMIIVGFIAIFILFFIYIHYWRCNRDEIVPNWPVIGMVPTFVRHVSDFNDFATLVLKRHGGTFRFQGPWFTNTSFIITTDPTNVDHISSKNFGNYGKGSNFQEIFDFFGDGIINSDSHDWKQKRTMYHLILKGKSFKKMLSQIIQKKVENCLLPFLKDVCEEGVHVDLQDALNRFTFDTNCTIVFGFDPNTLPNKFGELREIAYQKSLPVIEEVIFYRHFIPSFLSRLQKWIHVGQEKKLKIAGENLDRFLYESITFSKQEQSKCSEKIDECYFDLVKALQKEGYGEGKMGEKYLRDIILNLLIAGNGTISSGLSWFFWLVSTHPIVEAKIIQEIKDNCITQNENWSISRVEDLDKLVYLHGAICEALRLYPPIPFEHMCAIKSDILPSGDRVSQNTKVMYSLYEMGRMEQIWGEDCMKFKPERWVSETRHIIHVPSYKFIAFNTGPRSCLGKDISFFQMKMVAASILSKFHIQVVEGHPVTPKLSIVLRMKHGLKVKPTKRCI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2384 505 Gene3D Cytochrome P450 17 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2384 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Tpr1g2384 505 PANTHER CYTOCHROME P450 15 500 - -
Tpr1g2384 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 500 - -
Tpr1g2384 505 Pfam Cytochrome P450 31 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2384 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2384 505 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2384 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2384 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2384 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2384 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2384 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2384 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2384 505 SUPERFAMILY Cytochrome P450 19 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2384 Tpr-Chr1 26734680 26736197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2384 1 503 Cytochrome P450 AT2G23180 41.359 2.71e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2384 - - mtr:MTR_1g035760 716.457