Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2324 ATGGGTAACGGCACTTCTCGTGTTGTTGGCTGTTTAGCACCATTCAATGGCAAAAATGGTGTTGATTTGGAGTTTTTAGAGCCATTAGATGAAGGTTTAGGTCATTCCTTTTGTTATGTTAGACCGACTATGTTTGAATCTCCGGCTATTAGTCCGTCGAATTCTGAGAGGTTTACGGTTGATTCAAGTACTCTTGATTCTGAAACCTTGAGTGGTTCCTTTAGGCATGATAGTATGGAGCATTCTAATTCTTATGGTTTGCATAAGCAGGGTAAGACTTTCCCTGAAACGACGTTCAAAACGATTTCGGGGGCTTCTGTTAGTGCTAATGTTTCCACAGCTAGGACTGGTGGTAACCAGAGTGCATTGTATGCTGGTGATTTCTTGGAACCTGCTGCATCGTTTGAGGGAACTGCTTCATTTGCTGCGATTCCTTTGCAGCCGGTTCCTCGTGGTTCTGGACCTTTAAATGGTTTCATGTCTGGTCCTTTGGAGAGAGGTTATGCCTCGGGTCCGTTGGATAGAAGCGGTGGTTTCATGTCTGGGCCAATAGAGAAAGGAGTTATGTCAGGTCCTCTTGATGATACTGATAAATCCAACTTTTCAGCTCCGCTTGCGCGTGGTCGCCGGAGACCACGTCTACAAAATCTCATGAGAAGTGTTAGTGGACCAATGAAGAACACCTTTTCTCGAACGTTCTCTAAGCATTCCATGGGTGGAAGTTGGATGCAAAGGTTGTTCGTTCAACCGGTTACTCAATTGGCATGGCATTCCAGAGACGCAAAGTGTAGACCGGAAGTCTCTAGGAACTGTGGTGTTGATGTTGGACCATATGAAACTGAGTATAAACACACACATAATTTGCAGTGGGCACAGGGAAAGGCTGGTGAGGATAGGGTTCACGTAGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGACGGTTTTAGCGGACCAGATGCTCCTGATTTTTTGATGAGCCATCTTTATAGATTTCTAGACAAAGAATTGGAAGGTTTACTTTGGGATTATGAAGATAATCCTGTAGATCCACTTAAACCTGAAGTCCCTGAAACTGTAAAATCCACCACTGCTCCAGAATGCAGTGGGCCAGAAATGTCTGATACTTGTACTAATTCTAATCAAGAATGTTTTGAAGCTTCTTCTGGTCCTGAGTTAATCAAGGATCAATCAAATAACAGTGAAATAGTTGAGATGAATACTGAAGTTAATGTAAATGTTGAACACCAGTTATCTAATAGTGTAAGTAACTCGTCAACTGTTTCCAATTCGGTTCAACATGGACAGTTGACCGGGAAAGGTAGAAAAAGTATGAGGCTTTATGAGTTACTTCAGATGGAATCATGGGATGAACAAGGTTTTTTGTCAGACTCGACACAATGTAAAGATTCTTCAGTTCCGAAGGAGTCAAAACTAGATGGGCATACAAGATCTTTCTCGTCTAGTTTAAGAGAAGATGGCTCTAGAAATCAGGATGAAGTCCCGTCTACATCAGGTGAAAATGGAGGCACTAGGTTTGATTCAACCAAACCGGAGCATGAGGCTGTTTTTTCTGTTTCTGAATCAAGACAGAATTCAAAGAAGTCATTTATCAGTGCAAAAATTAAAAAAATGTACAGGAAGCCAAAGTCCTTGTATAAGAAACTCTTCCGTTGGAGTTATGATTGGCATAGGGAGGAAATTCGTGTTGACGAGAAAATAATAGAAGCATCAGGACCTATTAGAAAATGCAGGTCTGGAGTAGATCATAACGCGGTTTTAACAGCAATGGCACGGGCTCTTGAAAGAACAGAAGAGGCATACATGGAAATGACAGAGCATAATCTGAAAAAAAATCCAGAACAAGCTATAATGGGATCATGTGTTCTAGTGATGTTGATGAAGGATCAAGATGTTTATGTCATGAATTTGGGAGATAGTCGTGTGATTTTGGCTCAAGAAAAATCAAACGATCGTTATCCTAATTCAAGTTCTGTCAAGGATGACATGAGGCATAGAAATAGATCTAGAGAGTCATTAGTACGCATGGAGCTCGATAGGATTTCAGAGGAGTCCCCAATTCACAACCATAACAGTCATGTTATCAAGATGAACAAAAACCGCGAGATATCCTTTTGCAAAGTAAAAATGAGGGCTCTGCAGCTTTCTACAGATCACAGCACCGATATTGAAGAGGAAGTTTTCAGAATAAGAGCAGAACACCCTGATGATAATCAAGCCATATTAAATGGTCGAGTGAAAGGACATTTAAAAGTTACCAGAGCATTTGGTGCCGGGTTCTTGAAGAGGCCGTCTTTTAATGACGCTCTACTTGAGGTGTTTCAAATTAATTATGTCGGCTTTGCTCCCTACCTAAGTTGCACTCCTTCTGTTCTTCACCACCGACTTTCCTCAAGTGATCGATTCTTGGTACTCTCCTCAGATGGGCTTTACCAGTATTTCAGCAATGAAGAGGTAGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCAGAAGGTGATCCCGCACAGTACCTTATTGCAGAGCTTCTCTTCTGTGCCGCTAAAAAGAACGGAATGGACTTCCATGAATTGCTTGATATTCCTCATGGAGATCGACGGAAATATCATGATGATGTATCTGTCATGGTTGTTTCTTTGGAAGGAAGGATTTGGAGATCATCAGGATAA 2700 0.4159 MGNGTSRVVGCLAPFNGKNGVDLEFLEPLDEGLGHSFCYVRPTMFESPAISPSNSERFTVDSSTLDSETLSGSFRHDSMEHSNSYGLHKQGKTFPETTFKTISGASVSANVSTARTGGNQSALYAGDFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGYASGPLDRSGGFMSGPIEKGVMSGPLDDTDKSNFSAPLARGRRRPRLQNLMRSVSGPMKNTFSRTFSKHSMGGSWMQRLFVQPVTQLAWHSRDAKCRPEVSRNCGVDVGPYETEYKHTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFLDKELEGLLWDYEDNPVDPLKPEVPETVKSTTAPECSGPEMSDTCTNSNQECFEASSGPELIKDQSNNSEIVEMNTEVNVNVEHQLSNSVSNSSTVSNSVQHGQLTGKGRKSMRLYELLQMESWDEQGFLSDSTQCKDSSVPKESKLDGHTRSFSSSLREDGSRNQDEVPSTSGENGGTRFDSTKPEHEAVFSVSESRQNSKKSFISAKIKKMYRKPKSLYKKLFRWSYDWHREEIRVDEKIIEASGPIRKCRSGVDHNAVLTAMARALERTEEAYMEMTEHNLKKNPEQAIMGSCVLVMLMKDQDVYVMNLGDSRVILAQEKSNDRYPNSSSVKDDMRHRNRSRESLVRMELDRISEESPIHNHNSHVIKMNKNREISFCKVKMRALQLSTDHSTDIEEEVFRIRAEHPDDNQAILNGRVKGHLKVTRAFGAGFLKRPSFNDALLEVFQINYVGFAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFCAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2324 899 MobiDBLite consensus disorder prediction 664 678 - -
Tpr1g2324 899 MobiDBLite consensus disorder prediction 658 678 - -
Tpr1g2324 899 PANTHER PROTEIN PHOSPHATASE 2C 11 899 IPR015655 GO:0004722|GO:0006470
Tpr1g2324 899 MobiDBLite consensus disorder prediction 464 531 - -
Tpr1g2324 899 CDD PP2Cc 596 890 IPR001932 -
Tpr1g2324 899 ProSiteProfiles PPM-type phosphatase domain profile. 281 890 IPR001932 -
Tpr1g2324 899 SMART PP2C_4 281 888 IPR001932 -
Tpr1g2324 899 MobiDBLite consensus disorder prediction 474 501 - -
Tpr1g2324 899 MobiDBLite consensus disorder prediction 423 441 - -
Tpr1g2324 899 SUPERFAMILY PP2C-like 293 891 IPR036457 -
Tpr1g2324 899 MobiDBLite consensus disorder prediction 423 443 - -
Tpr1g2324 899 PANTHER PROTEIN PHOSPHATASE 2C 32 11 899 - -
Tpr1g2324 899 Pfam Protein phosphatase 2C 609 660 IPR001932 -
Tpr1g2324 899 Pfam Protein phosphatase 2C 723 838 IPR001932 -
Tpr1g2324 899 Gene3D - 266 442 IPR036457 -
Tpr1g2324 899 Gene3D - 505 896 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2324 Tpr-Chr1 26109407 26114920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2324 1 899 PP2C-type Phosphatase Gene Family AT2G46920 61.700 0.0 1070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2324 - - cam:101510249 1562.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2324 1 26109407 26114920 Tpr1g2324 1 26109407 26114920 ECH