Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2316 ATGGGATATTTGATTATTGCTATTGCCATGGTGACTTTCACTATTATGATCTCAAAAATTTGGACAATATTTTTAATTGTCTTTTGGAGGCCATATGCACTAACTAGGCATTTTAGAAAGCAAGGAGTGATGGGGCCACGTTACTCACTTCTTTCCGGTTCTCTTCATGATATCAAAACAATGACTATTGATGCAAGGAAAAGTGTCATGGATAAACATTCAAATGATATTACTCAAAGGGTTCTTCCTCATTACCAAATATGGTCTTCTTTATATGGAGAGAGATTTCTATATTGGTACGGAACAGAAGCAATGATTTGCATCTCTGATGTAGAACTGGCGAAGGAGATTTTATCAAATAAATTTGGTTTCTATCCAAAACGCAAAGTAAGGCCTTCTCTAGTAACACTTATAGGAGAAGGGTTAATTCTTTCAGATGGAGTGGACTGGGTTAGCCGCAGAAGGATACTCAATCCTGCTTTCTCCATGGATAAACTCAAGGTTATGATAAGTAGAATGGCATCATGTACCATTTCCATGGTAGATGAGTGGAAAACGAAAGCCATTGAAGCAAAGGATAAATCAATGACAATAGAGATGAGTAAAGAATTTAAAGAGCTAGCAGCAAATATAATCGCCCACACTTCCTTTGGTACCAGCTATGCTCATGGAAGAGAAGCTTTTAAAGCACAAACAGAGCTTCAATTGCTTTGTGCAGCTTCAAATTCTAACATTTTCATTCCTGGAACACAATATTTACCTACTAAATCAAATATTGAGATATGGAAGCTTGATAGAAAAATCAAGAAATCACTACAATGCATTATTGAAAGTAGGTTAAGTTCTCAATCTGATCACTGTTCTTATGGAGATGATCTACTAGGAATAATGATGGATACAAAGAATGATGGTGCTAATGAATTGAAGATGAATGAAATTATAGAAGAATGCAAGACCTTTTTCTTTGCTGGCCATGAAACCACTTCAAATTGGCTTGTTTGGACTGTCTTTTTGTTGAGTTTGCATAAGGATTGGCAAGAGAAACTTAGACAAGAGATCTTGGAGATTTGTGGTATGGAAATTCCTGATGCAGATATGCTATCAAAGTTAAAAATGGTGAACATGGTGTTGTTAGAAGCATTAAGGTTGTACTGTCCTGCAATAGAACTAGAAAGAATAGCTTCAAAAGACATGAATTTAGGAGATTTGATGATACCAAAAGGAACATGTATCAAAATCCCAATTACAATGATTCACAGAAGTACAAAATACTGGGGTGAAGATGCAAATGAGTTCAATCCAATGAGATTCATAAATGGGGTATCTAAGGCTGCAAATCACCCAAATGCTCTACTTGCATTTTCTGTAGGTCCAAGAAATTGCATTGGTCAGAATTTTGCTATGTTGGAAGTTAAAACAGTGATGACTTTAATTCTTCAAAGGTTTTCTTGGTCCCTTTCCCCTGAATATCAACATGCACCTGTTAACCTCCTCACTTTGCAGCCACAACATGGTATTCCCATCATTATAAAACCATTGGAGCTGTAA 1548 0.3611 MGYLIIAIAMVTFTIMISKIWTIFLIVFWRPYALTRHFRKQGVMGPRYSLLSGSLHDIKTMTIDARKSVMDKHSNDITQRVLPHYQIWSSLYGERFLYWYGTEAMICISDVELAKEILSNKFGFYPKRKVRPSLVTLIGEGLILSDGVDWVSRRRILNPAFSMDKLKVMISRMASCTISMVDEWKTKAIEAKDKSMTIEMSKEFKELAANIIAHTSFGTSYAHGREAFKAQTELQLLCAASNSNIFIPGTQYLPTKSNIEIWKLDRKIKKSLQCIIESRLSSQSDHCSYGDDLLGIMMDTKNDGANELKMNEIIEECKTFFFAGHETTSNWLVWTVFLLSLHKDWQEKLRQEILEICGMEIPDADMLSKLKMVNMVLLEALRLYCPAIELERIASKDMNLGDLMIPKGTCIKIPITMIHRSTKYWGEDANEFNPMRFINGVSKAANHPNALLAFSVGPRNCIGQNFAMLEVKTVMTLILQRFSWSLSPEYQHAPVNLLTLQPQHGIPIIIKPLEL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2316 515 PANTHER P450, PUTATIVE-RELATED 6 509 - -
Tpr1g2316 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Tpr1g2316 515 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2316 515 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2316 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2316 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2316 515 Pfam Cytochrome P450 91 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2316 515 SUPERFAMILY Cytochrome P450 78 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2316 515 Gene3D Cytochrome P450 27 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2316 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 509 - -
Tpr1g2316 515 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2316 515 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2316 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2316 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2316 Tpr-Chr1 26004632 26009736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2316 24 514 Cytochrome P450 AT2G46960 55.622 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2316 K20660 - aprc:113872106 776.163