Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2302 ATGTATGGAGTCTCACAAAAGTCAAGTCTCTCTGCGAAACTCGGTGCAGAACACGTAAAAGGAGAGAAAAAGTGTCTGAATTATCGGTATCCAATTAGCGTAATATTAGTTGTAATAAGTAACAAAATATCCTTCTCTCCACTACTATTAAGCGCACAATTAAATTACTATATTCTGTTTCCAACTCAAAACGAGTCAAAAAGCTTCGCTGGTACTTCTTCTCCTTCTCCTTTATCCTACGCACCACTTTCTGCTTATCCTACGCTTCTCTCAATTCCTCAACAACAACGCTTTCACTCTTCAACACTCTCACAATTCAGCAATTTCACTCTTCCGTTTCATTTCAGGAAAAGAATCATGAGTTGTTTCAGCTGTTGCGAAGAAGATGAGTTCCACAAGACTGCTGAAAGTGGCGGACCGTATGTTGTAAAAAATCCAGCAGGGAATGATGGAAATTATCCTGCCTCCGAGACTGCAAAACAGGGAGCTCAAACTGTTAAAGTGCAGCCCATTGAAGTTCCCGAGATACAGGCAGATGAACTGAAAGAAGTTACAGATAACTTTGGACAAGATTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGAGTTCTTAAAAGTGGGCAGGCGGCAGCAATCAAGAAGTTAGATGCCAGTAAACAGCCTGACGAGGAATTCTTGGCTCAGGTTTCAATGGTATCAAGGCTGAAACACGATAATTTTGTCCAGTTGCTTGGATATTGCGTTGATGGAAACTCCCGTATTCTTGCTTATGAGTTTGCATCTAATGGGTCTCTTCACGACATTTTACATGGCAGAAAAGGGGTTAAAGGAGCACAGCCTGGTCCAGTTTTGACATGGGCACAGAGAGTAAAAATTGCTGTAGGGGCTGCAAGAGGGCTTGAATACTTGCACGAGAAGGCTGATCCCCATATTATCCACCGGGACATCAAGTCAAGCAATGTGCTAATCTTTGATGATGATGTTGCAAAAATTGCTGATTTTGATTTGTCAAATCAAGCTCCCGACATGGCTGCACGTCTTCATTCCACTCGTGTCCTTGGAACATTTGGTTATCATGCACCTGAATATGCAATGACTGGACAATTGAATGCTAAGAGCGATGTATACAGTTTTGGTGTTGTGCTTCTGGAACTTCTGACCGGAAGGAAACCTGTTGATCATACACTACCACGTGGACAGCAGAGTCTGGTTACTTGGGCCACACCAAAACTCAGTGAGGATAAAGTCAGACAGTGTGTTGATACAAGACTAGGAGGAGAATACCCACCAAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCACTGTGTGTGCAATATGAAGCTGATTTCAGACCTAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGACTGCCAGAGCTGGACCTGCTGGTGAAACAGCAAACTAA 1443 0.4283 MYGVSQKSSLSAKLGAEHVKGEKKCLNYRYPISVILVVISNKISFSPLLLSAQLNYYILFPTQNESKSFAGTSSPSPLSYAPLSAYPTLLSIPQQQRFHSSTLSQFSNFTLPFHFRKRIMSCFSCCEEDEFHKTAESGGPYVVKNPAGNDGNYPASETAKQGAQTVKVQPIEVPEIQADELKEVTDNFGQDSLIGEGSYGRVYYGVLKSGQAAAIKKLDASKQPDEEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILAYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAARGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDTRLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLTARAGPAGETAN* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2302 480 SUPERFAMILY Protein kinase-like (PK-like) 167 464 IPR011009 -
Tpr1g2302 480 Gene3D Transferase(Phosphotransferase) domain 1 263 473 - -
Tpr1g2302 480 SMART serkin_6 188 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2302 480 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 120 478 - -
Tpr1g2302 480 Pfam Protein tyrosine and serine/threonine kinase 192 464 IPR001245 GO:0004672|GO:0006468
Tpr1g2302 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Tpr1g2302 480 CDD STKc_IRAK 194 467 - -
Tpr1g2302 480 ProSiteProfiles Protein kinase domain profile. 188 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2302 480 Gene3D Phosphorylase Kinase; domain 1 150 262 - -
Tpr1g2302 480 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 120 478 - -
Tpr1g2302 480 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2302 Tpr-Chr1 25887821 25892016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2302 179 465 Receptor kinase-like Gene Family AT4G02010 51.546 7.56e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Tpr1g2302 PK_Tyr_Ser-Thr 3.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2302 K13436 - gmx:100808383 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2302 1 25887821 25892016 Tpr1g2302 1 25887821 25892016 ECH