Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2298 ATGGTTAGAATGCATGCAACACTCTGTACCTTAGTTCTAATTATTCTCTCAGTTTCAACATTGACATCATCAACATCTTTGGAGTTTGGTTTCTATAAGACAACATGTCCATCCGCTGAGGCAATTGTGAGAAGAGCTGTAAACAAAGCCGTGTCACTCAATCCAGGCATCGCTGCTGGTTTGATTAGATTGCATTTTCATGATTGTTTTGTTAGGGGATGCGATGGTTCTGTATTATTAGAAACTACACCAGGTAACCCATCTGAGAAAGACCATCCTGCAAACAATCCAAGTTTACGCGGCTTTGAGGTCATCAATGAAGCTAAGGCGCAAATAGAAGCTGCATGTCCTAAAACGGTGTCATGTGCAGATATTCTTGCTTTTGCAGCTCGGGACAGTACTCGCAAAGTTAGTGGCGGCATATACTATTCAGTACCATCAGGACGCAGAGATGGTCGAATCTCTATCTTCGACGAAGTCACACAAAATCTACTACCACCATCTACCGAAGCAGAGAAACTTATCAGTCATTTTGGTACAAAAGGCTTATCAGCAGATGAAATGGTTACACTTTCTGGAGCTCATTCTATTGGTGTCTCACATTGTTCTTCTTTCTCAAACCGATTATATTCTTTCAATGCAACTTTTTCTCAAGATCCATCTATGGACCCTAAGTTTGCTATGTTCTTGAAATCCAAGTGTCCACCACCACAACCTCAGTTACAGGTAAAAAACATAGACCCAACAGTGGTGTTTGATGGTTCCACGCCTAATGATTTGGACAACAAGTACTATATGAGGTTGAAGAATCACCGCGGTTTATTAACTTCCGATCAAACGTTGTATGATAGCGACTTAACTAGGCAGATGGTGTTAAGAAATGCCAGACATGCTGCAATCTGGAGAGTGAAGTTTGCTAAGGCTATGGTGCAAATGGGTTCCATAGATGTGTTGACAGGTTCTCAAGGTGAGATTAGGGAGCGCTGCAGCATTGTTAATTCTTATTAA 1008 0.4137 MVRMHATLCTLVLIILSVSTLTSSTSLEFGFYKTTCPSAEAIVRRAVNKAVSLNPGIAAGLIRLHFHDCFVRGCDGSVLLETTPGNPSEKDHPANNPSLRGFEVINEAKAQIEAACPKTVSCADILAFAARDSTRKVSGGIYYSVPSGRRDGRISIFDEVTQNLLPPSTEAEKLISHFGTKGLSADEMVTLSGAHSIGVSHCSSFSNRLYSFNATFSQDPSMDPKFAMFLKSKCPPPQPQLQVKNIDPTVVFDGSTPNDLDNKYYMRLKNHRGLLTSDQTLYDSDLTRQMVLRNARHAAIWRVKFAKAMVQMGSIDVLTGSQGEIRERCSIVNSY* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2298 335 SUPERFAMILY Heme-dependent peroxidases 27 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 Pfam Peroxidase 43 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 Gene3D - 30 333 - -
Tpr1g2298 335 CDD secretory_peroxidase 29 332 IPR033905 GO:0004601|GO:0042744
Tpr1g2298 335 PANTHER PEROXIDASE 20 331 - -
Tpr1g2298 335 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Tpr1g2298 335 ProSiteProfiles Plant heme peroxidase family profile. 26 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Tpr1g2298 335 Gene3D Peroxidase, domain 2 165 312 - -
Tpr1g2298 335 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2298 335 PANTHER PEROXIDASE 25-RELATED 20 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2298 Tpr-Chr1 25854645 25858543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2298 11 333 Peroxidase AT4G11290 44.308 4.01e-87 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2298 K00430 - gmx:100815158 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2298 1 25854645 25858543 Tpr1g2298 1 25854645 25858543 ECH