Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2265 ATGGAGAAGAAAGAGATGGGTGTGAAAAGTGAGGATATTAATATCGATTCCTCATCTTTGCTAAACAGTTATCAATTTTCAAGTGTCTTTGATTTCTGTGAGGTAGAAAAAAGCTCTTCTTTAGGGTTTATGGAGTTACTTGGTGTTCAGGATTATAGTCCTCTGCTTGATGTACCTCAACTATCAACCATGTCTATGAAAACAACTACAGTCATGGCTTCATCTGATACTGGAAAAGACTCTTCTGAAGTTTTGAACCAGCAACAACCTGCAACTCCTAACTCTTGTTCGATTTCATCGGCATCTAGTGAAGCCATCAATGATAACAAGACTTTTTTTAAACAAACTGAAGATGATGAAAGAGATGAAGAAGAAAAGCAAAAGACCAACAAACAGTTGAAGACGAAGAAAACAAATCAAAAGAAACAGAGAGAACCAAGATTTGCGTTCATGACAAAAAGCGAGGTTGATCATCTAGAAGATGGTTATAGATGGAGAAAGTACGGTCAAAAAGCTGTCAAAAACAGCCCCTTTCCAAGGAGTTACTATCGTTGCACCACTGTGTCATGTAATGTGAAGAAACGTGTGGAACGTTCTTTTACTGATCCAAGTATTGTAGTTACAACTTATGAAGGCCAACATACTCATCCAAGTCCAGCTATGTCGCGTTCCGCCTTTGTCGGAGCTCAAATAGCACCACCGGCCGGTTTAGTTTCCGGTGGATTTCCTACTAACTACGGCTCATTTTCGCAAGGGACTTATTTATCATCATCACAGTATCATCAGCAACAATTACTTGCTAATACATTTTCCTCATTGAATCATCCTTATAACAATTCTTCAGCTTTTATTCAAGACAGGAAGCTTTGTAATCAAGGGACAACAACTGCTGCTGCATTTCTTAGGGATCATGGACTTCTTCAAGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAG 960 0.3865 MEKKEMGVKSEDINIDSSSLLNSYQFSSVFDFCEVEKSSSLGFMELLGVQDYSPLLDVPQLSTMSMKTTTVMASSDTGKDSSEVLNQQQPATPNSCSISSASSEAINDNKTFFKQTEDDERDEEEKQKTNKQLKTKKTNQKKQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTVSCNVKKRVERSFTDPSIVVTTYEGQHTHPSPAMSRSAFVGAQIAPPAGLVSGGFPTNYGSFSQGTYLSSSQYHQQQLLANTFSSLNHPYNNSSAFIQDRKLCNQGTTTAAAFLRDHGLLQDVVPSHMLKEE* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2265 319 PANTHER WRKY TRANSCRIPTION FACTOR 1 311 - -
Tpr1g2265 319 Pfam WRKY DNA -binding domain 160 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g2265 319 MobiDBLite consensus disorder prediction 69 110 - -
Tpr1g2265 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 311 IPR044810 GO:0003700
Tpr1g2265 319 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g2265 319 PIRSF WRKY_txn_fact_IIc 1 319 IPR017396 GO:0003700
Tpr1g2265 319 MobiDBLite consensus disorder prediction 69 145 - -
Tpr1g2265 319 Gene3D WRKY domain 143 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g2265 319 SUPERFAMILY WRKY DNA-binding domain 151 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g2265 319 MobiDBLite consensus disorder prediction 111 132 - -
Tpr1g2265 319 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g2265 319 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2265 Tpr-Chr1 25436159 25438004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2265 28 319 WRKY Transcription Factor Family AT2G47260 47.748 4.33e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr1g2265 WRKY 2.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2265 - - gmx:732591 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2265 1 25436159 25438004 Tpr1g2265 1 25436159 25438004 ECH
Tpr6g0449 6 3674474 3676463 Tpr1g2265 1 25436159 25438004 PCT