Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2257 ATGGTGTCCAAACCTACCGATTCTTCTCTCCTACTTCATCAAGCATTACATGAAGAGCCAGTAAATGATGTTGTTGGAACCTTGACAAACAAGATAAATCAGCTGAAAAAGCAAATCCAGGCAGAGAGAATTGAATTCATTAGTGAAAAACTTCAGAGGAACAAGAAGAAGCTACAATGTCATACTTCAGGAATAATGTCAGAAGTATCAACCAGAGACTCTTCACATGCAGAGGAAAATCGGACATGTTCAATTCTTTCTTCAAGAATGGACCATCCTTTATGTAAATTCAATGGTTTTACCCAGGGTTCAGTAGACAAAAACCACAGCAATCAAGACATGTCATCTGCTACAAGCATCAAGATTCCTCGTGTTGAAAGATTGCCACCATATACATCTTGGATATTTTTGGACAGGAATCAGAGAATGGCCGACGATCAGTCAGTTGTTGGAAGAAGACGGATCTATTATGATCAACGTGGAAGTGAAGCATTGATATGTAGTGACAGTGAAGAAGAATTAACAGAACCTGAGGGAGAAAAACATGAATTCTGTGAGGCTGAAGACCGTATTTTATGGATGGCATTTGAGGAACATGGGTTAAATGAGGAGGTATTGAATGTTGTTAGCAAGTATGTTGAGGGCACCAATGTAGAAATCCAGGATAGGTACAAAAGCATCAGGGAAAATAATATTGGTAGGTTGGACCAGCAGCATTCAAAAAGCTCAGGAGAGCATGAATCTCCTATGAGCATGAATCTAGAGAAAAACCTGAGGGATGCATTAGATTCTCTTGATAACCTTTTCTGTCGCCGGTGCCTGATTTTTGACTGTCGACTGCATGGCTGTTCTCAACCTTTGATATATCCCAGTGAAAGGAAGACAGTTTGGTCTGAGCCTGAAGGTGATAGAAAACCATGTGGTGATCAGTGTTACCTTCAGTTAAAGGTTGTCAAAAGTTTGTCAAAAGATTCAACTCCCGGGTCTTTTCAGGATAAGAAAACTACAATTGTAGAGGAGACAAATGGGATATTGGCACCATCCAGCTCAGAAGAACCTGATAATTTGGGGAAACGGAAGGCCACAAATCAGTCAGACACAGCACAATGTGACTCGAGATATCCTCCTGATTCTCAGAATTCTTGTAAAAAGCTGAAGAGAATCTCAGATGTAGTTACTGTAATTAGTGATAATAGCAAGAACCTAAATTTGGGTGCATGTGATGAAAATACACATATAAATACTTGTGAAATTTTAGACAAATCTGTTGAACGTACTTCGAATAAACCAATAGCTCCTTCTAGCACTTGCCATAATGAGAATGACAAAGGTGTTGTGGATGGATCAAAAGCTGTCACAAATGAGACAGAACTTAAAAATTCGTCGAGTTCAGTGGAAGAACAAATTGATGGAATGCTTGGTTTCTCATATTGGAAACCTCTAGAGAAAGAGTTATACTTGAAGGGAGTGGAAATGTTTGGCAGAAACAGTTGCCTCATAGCTAGGAACTTACTTTCTGGTTTGAAGACTTGCATGGAAATATCTAGTTACATGCACGATGGAGGAGTGTCAATGCCCTACAGGTCTATTATTGCAGCTAGTTCAATCATGAATGACAGCGGAAAAATTGACACAGAGTGCACAGACCAAGAGATGCCATCTAGGTCACGGTTGCTGAGAAAAAGAGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGTCACCCAACAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACTCCATGTGGCTGTCAATCAATGTGTGGAAAGGAATGTTCTTGTCTTAGCAATGGAACATGCTGTGAAAAGTATTGTGGTTGTTCAAAAAGCTGCAAAAACCGGTTCCGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGACGTGAATGTGATCCAGATGTCTGTCGAAACTGTTGGGTTAGCTGTGGGGATGGTACATTGGGGGAGCCACCACGTCGTGGACAAAGTCAATGCGGAAATATGAGACTTCTTTTAAGGCAACAACAAAGGATTATCTTGGGGAGGTCTGATGTTGCAGGATGGGGAGCCTTCTTAAAGAATCCTGTTAACAAAAATGACTACCTAGGAGAGTACACGGGTGAGCTGATCTCACACAGAGAAGCTGATAAGCGTGGGAAAATATATGATCGAGCGAATTCTTCTTTTCTTTTCGATTTGAATGAGCAGTATGTTCTTGATGCTTATCGGAAAGGAGACAAGTTGAAATTTGCAAACCACTCATCAAATCCCAATTGCTATGCAAAGGTGATTTTGGTTGCTGGAGATCATCGAGTTGGCATATTCGCCAAGGAATACATTGATGCCAGTGAGGAGCTCTTCTATGATTATTGTTATGGTGTAGATCAAGCTCCTCCATGGGCTCGTAAACCTGAGGGTTCCAAGAGAGATGAATCAGCAGTTCCACAAGGTAGAGCAAAGAAACACCAATCCCATTGA 2532 0.4092 MVSKPTDSSLLLHQALHEEPVNDVVGTLTNKINQLKKQIQAERIEFISEKLQRNKKKLQCHTSGIMSEVSTRDSSHAEENRTCSILSSRMDHPLCKFNGFTQGSVDKNHSNQDMSSATSIKIPRVERLPPYTSWIFLDRNQRMADDQSVVGRRRIYYDQRGSEALICSDSEEELTEPEGEKHEFCEAEDRILWMAFEEHGLNEEVLNVVSKYVEGTNVEIQDRYKSIRENNIGRLDQQHSKSSGEHESPMSMNLEKNLRDALDSLDNLFCRRCLIFDCRLHGCSQPLIYPSERKTVWSEPEGDRKPCGDQCYLQLKVVKSLSKDSTPGSFQDKKTTIVEETNGILAPSSSEEPDNLGKRKATNQSDTAQCDSRYPPDSQNSCKKLKRISDVVTVISDNSKNLNLGACDENTHINTCEILDKSVERTSNKPIAPSSTCHNENDKGVVDGSKAVTNETELKNSSSSVEEQIDGMLGFSYWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEISSYMHDGGVSMPYRSIIAASSIMNDSGKIDTECTDQEMPSRSRLLRKRGKTRKFKYSWKSAGHPTIWKRIADGKNQSCKQYTPCGCQSMCGKECSCLSNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGTLGEPPRRGQSQCGNMRLLLRQQQRIILGRSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNEQYVLDAYRKGDKLKFANHSSNPNCYAKVILVAGDHRVGIFAKEYIDASEELFYDYCYGVDQAPPWARKPEGSKRDESAVPQGRAKKHQSH* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2257 843 MobiDBLite consensus disorder prediction 820 836 - -
Tpr1g2257 843 Coils Coil 25 45 - -
Tpr1g2257 843 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 19 843 IPR025778 GO:0031519
Tpr1g2257 843 MobiDBLite consensus disorder prediction 360 378 - -
Tpr1g2257 843 Pfam CXC domain 633 664 IPR041355 -
Tpr1g2257 843 CDD SET_EZH 694 810 - -
Tpr1g2257 843 SUPERFAMILY SET domain 595 812 IPR046341 -
Tpr1g2257 843 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 18 841 - -
Tpr1g2257 843 Gene3D SET domain 595 810 IPR046341 -
Tpr1g2257 843 SMART CXC_2 629 666 IPR033467 -
Tpr1g2257 843 MobiDBLite consensus disorder prediction 819 843 - -
Tpr1g2257 843 Pfam SET domain 705 808 IPR001214 GO:0005515
Tpr1g2257 843 ProSiteProfiles SET domain profile. 694 809 IPR001214 GO:0005515
Tpr1g2257 843 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 18 841 IPR045318 GO:0006338|GO:0018024
Tpr1g2257 843 SMART set_7 694 815 IPR001214 GO:0005515
Tpr1g2257 843 MobiDBLite consensus disorder prediction 340 378 - -
Tpr1g2257 843 ProSiteProfiles CXC domain profile. 581 680 IPR026489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2257 Tpr-Chr1 25351241 25360870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2257 683 808 C2H2 Transcription Factor Family AT2G23740 25.874 3.03e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tpr1g2257 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2257 - - gmx:100808730 1341.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2257 1 25351241 25360870 Tpr1g2257 1 25351241 25360870 ECH
Tpr6g0460 6 3761292 3766056 Tpr1g2257 1 25351241 25360870 PCT