Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2253 ATGGCGTCGAGTCAACAACAACGTCCTGTGAGTTCAGGATCGGACGGCGGAGATCTACAAATTGACGAAAGGAAGAGAAAGAGAATGTTATCTAACCGTGAATCTGCTCGACGATCGAGAATGAGAAAGCAGAAACAGATCGAAGATCTGACTGAAGAATCTGGTAGATTGCAAATCGAGAACGATCATGTGGCGAAGAGGATAAAAGCGACGGAAGAAGCTTATGTTGAGATGGAAGCTGCAAATAATGTTATCAGAGCACAGACTATGGAATTGGCTGAACGATTGCGGTTTCTGAATTCGGTTATCGATGTTGCTGAAGATGCTAATGATTTTTCTGTTGAAATGGCTATGATTCCTGATCCTCTTCTGAAACCGTGGTTTATACCGCATTATTATTCGGCATCAAATGACATGTTGCTGCGTTGA 429 0.4266 MASSQQQRPVSSGSDGGDLQIDERKRKRMLSNRESARRSRMRKQKQIEDLTEESGRLQIENDHVAKRIKATEEAYVEMEAANNVIRAQTMELAERLRFLNSVIDVAEDANDFSVEMAMIPDPLLKPWFIPHYYSASNDMLLR* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2253 142 SUPERFAMILY Leucine zipper domain 24 78 IPR046347 GO:0003700|GO:0006355
Tpr1g2253 142 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 85 IPR004827 GO:0003700|GO:0006355
Tpr1g2253 142 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 133 - -
Tpr1g2253 142 Pfam bZIP transcription factor 24 81 IPR004827 GO:0003700|GO:0006355
Tpr1g2253 142 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Tpr1g2253 142 MobiDBLite consensus disorder prediction 1 54 - -
Tpr1g2253 142 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 133 - -
Tpr1g2253 142 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Tpr1g2253 142 Coils Coil 33 60 - -
Tpr1g2253 142 Gene3D - 22 104 - -
Tpr1g2253 142 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Tpr1g2253 142 MobiDBLite consensus disorder prediction 18 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2253 Tpr-Chr1 25328944 25330389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2253 22 140 bZIP Transcription Factor Family AT3G62420 47.541 9.18e-33 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr1g2253 bZIP_1 4.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2253 K25786 - gmx:778144 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2253 1 25328944 25330389 Tpr1g2253 1 25328944 25330389 ECH
Tpr6g0467 6 3802389 3803561 Tpr1g2253 1 25328944 25330389 PCT