Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2163 ATGGAAAACAACGGTGAAGTCGGTGATAGTGAGAGTAAGATCGAAATCAGTGATGACAGTTTGAGTAAGATCCAAATCGGAGTCAGTGAGACTCGATTCAGTGACAGTGAGATCGATGATCTTCGACGGTCTATTAAGGGTGTAAACGTCTTCATCGCCGAAGAAGACAGCGCAAATCACAGCGCAAGTCTAAACGTCTTCAACGCCGAAGAAGACAGCGCAAGTCACAACGGTGAAGTCGGTGATAGTGAGAGTAAGATCCAAATCAGTAAGATCCAAATCGGAGGCAACAGTGACAGTGAGATCGATGATCTTCGACGGTCTATTAAGGGTCTAAACGTCTTCAACGTTGAAGAAGACAGCGCAAGTCACAGCTCAGCCGACAACATATTGTTCAAAAACTACGAGGAAGTGTCTGTGCATCGAAATATGTTACAGGATACCCCTAGGATGGTGGCCTACAAATCGGCCATATCTTACCATCAGAAGGACATAGAAGGAAAAGTTATTGTTGATGTCGGCTGTGGCACGGGTATTTTGTCGATTTTGTGTGCAAGGGCTGGAGCTAGGAAGGTTTATGCCATTGAGGCGTCTGGGATGGCTCTACATGCTGAAACCATTGTAAAAGTCAATGGATTGTCTGATGTTATAAAGGTGTTGCATTGCAAAGTTGAGGATGCAACAATAGAGGAACAAGTAGATGTGATTATATCTGAGTGGATGGGCAACATGTTGTTCCAAGAGAACATGCTTCCAACGGTCATTTCAGCCAGAGATCGTTGGCTTGCGGTTGGAGGATTACTGCTTCCTAGCTCTGCATCGTTGTATATGGCTCCTTTCTCTGATAGGGACAGATATTACAGTAACATTGGCTTTTGGTCCAATGTCGATGGAATTAACATGTCTGTTTTAATTCCATCGGCGAAGACTTGTTTCTGTAGTAGTCCTAAAGTAGAGACAGTTGAGCTGGCCAGTCTTTTGGCAGACCCTCATCAGGTGATAGAGGTAGACATGCACTCGATTAGTAGTTCTGATTTGGATTCTATCAGCACAGCTTTTGAGTTCCACTCATATAGGAGTGCACCACTACATGGGTTTGCACTTTGGTTTGATACTAGATTTTCCCGGCTACCACGAGTCATGCCTGGAGCACCCATTCTATCTACTGCTCCTAGTGCACCATCGACACATTGGCAGCAGACGTTGCTAGATTGTGAGGATCCAATTGATCTAGAAGAAGATCAAGTGATTCTAGGATCATTAGAGATTAAGATTGACAGATACTACCCTCGGATTCTGCATATAGATCTTTCATATGGGTTAAAGGGTGGTGAATTGTCTAAGATCAAGACAAGTTTCTGA 1362 0.4398 MENNGEVGDSESKIEISDDSLSKIQIGVSETRFSDSEIDDLRRSIKGVNVFIAEEDSANHSASLNVFNAEEDSASHNGEVGDSESKIQISKIQIGGNSDSEIDDLRRSIKGLNVFNVEEDSASHSSADNILFKNYEEVSVHRNMLQDTPRMVAYKSAISYHQKDIEGKVIVDVGCGTGILSILCARAGARKVYAIEASGMALHAETIVKVNGLSDVIKVLHCKVEDATIEEQVDVIISEWMGNMLFQENMLPTVISARDRWLAVGGLLLPSSASLYMAPFSDRDRYYSNIGFWSNVDGINMSVLIPSAKTCFCSSPKVETVELASLLADPHQVIEVDMHSISSSDLDSISTAFEFHSYRSAPLHGFALWFDTRFSRLPRVMPGAPILSTAPSAPSTHWQQTLLDCEDPIDLEEDQVILGSLEIKIDRYYPRILHIDLSYGLKGGELSKIKTSF* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2163 453 Gene3D Vaccinia Virus protein VP39 124 270 IPR029063 -
Tpr1g2163 453 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 83 440 IPR025799 GO:0016274|GO:0018216
Tpr1g2163 453 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 443 IPR029063 -
Tpr1g2163 453 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3 83 440 - -
Tpr1g2163 453 Gene3D - 272 452 - -
Tpr1g2163 453 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 120 431 IPR025799 GO:0016274|GO:0018216
Tpr1g2163 453 Pfam Ribosomal protein L11 methyltransferase (PrmA) 166 247 - -
Tpr1g2163 453 CDD AdoMet_MTases 170 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2163 Tpr-Chr1 23027438 23039700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2163 132 420 C2H2 Transcription Factor Family AT3G12270 37.049 4.31e-51 180