Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2160 ATGGATCCCAACAATTCTTCTAATTATCCCAACAATTCTCAAAATCCCAACAATTCTCAAAACTCCAACAATTATCAAAACCCCAACAATTATCAAAATCCCAACAATTATCAAAATTCAAATCAATTTTTCAATCAATATCCTCAAAACACACCTAATTTTGGTTTAACACCAAATTTCAACCAATCATCCTTTGTTCCAAATTTTCATCCATATTATGGAACTATGCTGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTACATGCCGATGGTTAATGAAATTTTTTCGAGTGGTGGTACAACTAACTTTCCCGAATTTTCAACACAATTAACTATTGTTAATGAAGATTCAACTCCTGTGAGCAAGAAAAACCATCAACCATCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATCAAATTTGGAACAAGCAGTGTTGTCGGGAAAAACCAGAAAGGTGAAACATATTGGGGTCAAATTGCTGACTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGAGTTGCATGCCGAAACCGTTTTAATTATATGAACAAAATACTAGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCATCTCCAAGGAAGTGGTTGGTCCGAGAATGATGTTTTGGCAAAAGCGCAGGAAATATATGCATGTGGGAAGAATGTTCGGTTCACTTTAATGGAAGAATGGAATGCTCTCCGTGATCAACCACGTTATAGTAGTCAAGTAGGATCTGGAAGTAGTGGATCTAAGAGATCTCACGAGAGTGATGCATGTGGCTCAAACTCTGTAGGATCTAGTGCTCGTCCTATAGGTAGGGATGCAGCCAAAAAGAAGGGAAAAAAGAAAGCTTCCACACCCACAGAGGTGGTGGACAAAGAATGGGATACTTACATGAAAATGAGGGAGAAAGAGGTGGAACATTTGGCAATGGTAGTTTCCAATCAACAAGAGAAAAACAGACTTAAGAAAATGAAAATGTATCTGAAGTTAAGTTCTGATGAGAATCTCGATGACCGGAAGAAAGCCATGTTGGACACATTGGCCCAAGAACTGTTTCCATAA 1095 0.3863 MDPNNSSNYPNNSQNPNNSQNSNNYQNPNNYQNPNNYQNSNQFFNQYPQNTPNFGLTPNFNQSSFVPNFHPYYGTMLRNPSQTPPFNGYMPMVNEIFSSGGTTNFPEFSTQLTIVNEDSTPVSKKNHQPSWNTEQNLVLISGWIKFGTSSVVGKNQKGETYWGQIADYCNEHCSFDPPRDGVACRNRFNYMNKILGKWIGAYDGAKHLQGSGWSENDVLAKAQEIYACGKNVRFTLMEEWNALRDQPRYSSQVGSGSSGSKRSHESDACGSNSVGSSARPIGRDAAKKKGKKKASTPTEVVDKEWDTYMKMREKEVEHLAMVVSNQQEKNRLKKMKMYLKLSSDENLDDRKKAMLDTLAQELFP* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2160 364 PANTHER PUTATIVE-RELATED 62 349 - -
Tpr1g2160 364 MobiDBLite consensus disorder prediction 247 278 - -
Tpr1g2160 364 PANTHER - 62 349 - -
Tpr1g2160 364 MobiDBLite consensus disorder prediction 247 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2160 Tpr-Chr1 23023689 23025000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2160 97 331 Glutathione S-transferase Gene Family AT5G41240 27.547 7.83e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2160 - - mtr:MTR_5g077245 395.971