Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2154 ATGGACAAAATCAAATCTCACCACACCAACTCCAAACTTCATCTTCCTCAAGGGAAAGATCAGATTCCTAAACAGCGACAACATCCTGATTTATCTCCTGATTCTAGTTCTTCCAGTGGTGGGGTTGCAGACAAAGATTCGTTCTCATTTAAATTTGGGTGGAAATCTTCTAAACAATCAGTTGGAACTCCAATTAAGAAGTTGTTAGCCGAAGAAATGTCACCGGTGACTCAATCCAAAAGAAGTTCCCCGGGTGTTATAGCTAGATTGATGGGGCTTGATGGCCTTCCATCACAGCAGTCTACTAATAAGCAGCACAAGGATCTACAGAAGTCAACACCTTTGGAGAAAACTCGAAACAGAGGAACAGTAAATGAAGGCCGGTCGTCTAGGAGAAGCTCAAGGGATCAGGAAGAATTTAAGGATGTATTTGAGGTCTCAGAGATCCCGAAGGTAGAGAGCGGTAGGTATTCATCTTCAAACTTGAAGGTCAATGAAGATGAAATGTCATTTATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCGACTTATCAGGATTTTCAGTCTTCAAAAGATTTCCATGATACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAGTACTTGAAGCGGCCAGATTCTTTGTTTAAAAAGCATTTGAATGATCTGCAAGATACCCCTTTCCAATCACATTCCAGTCATGTAGAATCAACTAATATGGAGAACTTCGAACATGATTTCAATTGGAGATCAGATAGGGAGACAACACAGGTGAATTACAATAGGTTTCATCAGAAGCAGCGTGATGGTTATCATGGCCAATTTGACAAAAGACGTGTGATGCATAATTCACCAAGATCATCAAAGCACCAGTTTAAGAGTAGCCATGAACAAGGTCCAGTCCCAACAAAAATTGTTGTCCTAAAACCGAATCTTGGAAAATTGCAGAATGGTACCAGAATTGAATCATCACCTTGTTCTCCACGTAGTTTTATGTCAGAACATGGAAATCATGCTGAATTTCCAGATGTCAGATTTAGAGGTACTGAAATGTATCAAAAAATAAATTTGCCTGACAGTGCCAGGTCTTATAGACACAATTCTTTAGAATCTAGAGAGATTGCAAAGGAAGTAACTAGGCAAATGAAAAACAGTTTGAGCAATGGTTGCACGTTGTCTTCCTCTTCTAGATTTAAAGGATACACTAGAAATGATAGTTCAAGCAGTGTTTCTGGGAATGAATCTCCAGAGGAAATAACAGCAACTTCGGGTGACCCGTTTGACTTAAATAAACGTAGCAGACGGTCACCGCGTTCTAGTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAGATGGCACACAAGTCTCAAGAGGTGCAAGGCACCAGCAGGAGCAGCACACTGGGTGATATGCTAGCATTCCCTGGTAAGAGAATGAAGGGTACACGATTTGACAGCATGACTGGTGGGGAAGGTTTCTATGATAAGTTTGCTCGCAAGGGTGAACCTTCTGAGTGGGTTGAACCACTGGGTATCAGCAGCAAGGATGGTTGGAGGGATGCAAGCATTGGAAGTTTGTCAAGGTCAAAATCTCTTCCTGCTTCTGCTACTGTCTTTGGAAATCCTAGAACATACTTGTGTGCTGAAGCACTTCGTAATGATCGATATATGGTGCCAAAGGATCTTAAAAGGGAGAGGAGAAGAGCGACAAAGACTCTTGATCATAGACATGGTATGACTTCTAGAAGCACAATATCTGGTCACAAGAAGTCTTTGTCTTTGGTTTCATTGAAGCAGGAAGTTAGCGAGTTCTCTCCAGACTTAAATGCAGTTCAAAATAACTTAAAGATCAATCTTGAAGAAAATGCACCCAATCTAGAGGTTCTGACCCCTGAAGCCTTTGATCAGACCCTTAGAGATAGAAGTGCTGTTAATGATGATATTAAGGATGCTGCAAATGAAAACTCTGAACCTTCTTCAGATAAGGATGCATCAGCTGGTTCTACTGGTGGAATTTCAGTCCTCCCTGAAGCACCTGTGCCTGGACTTGAATCTCCATGCTGTAAAGATGCTGATCAGCCCAGTCCGATCTCAGTTTTAGATCCTTCTTTTACAGATGATTTGTCATCTTGCTCAGAATGTTTTGGAAGTGTCAGTGCTGACCTACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGAACACGTGGAGGGACCTATGCTAATTTCAAGTGATGAAGATGGCGGGGAAGCAGCTGTTGGAATGTTAGAAGGCAATGCATTATGGAGAACCGAAGATAGCTGGGAGTCTTCTTACATTATTGATGTCTTGTCTGAATCTGCTATTATTGAGGCTCGAACTGATAATGTTTTGGAAGTTTGGCATTCTCTAGAAAGCCCTGTGAGTCTTTCTGTGTTTGAAGAACTCGAAGAGAAGTACAATGATCGGACCATTTGCTCAAAGTCTGAAAGAAGATTGCTTTTCGACCGCATCAATTCAGGAATCGTCAAGATTCATGAGCAATCTACTAACCCACAACCATGGATGGTAAATGCAGCTCTAAGTTTTGGATCAAAAAGGATTAATGGGCTTCAAGATGGTCTTTTCCAGATGCTAGGGAGCCAAGGAAAGGTAGAGGATGATGTCCTGGGTAAGTTGCTGATTGTGGAGTCTCAATGGTTGAAATTGAGAGATGACATTGATGTAATAGGCAGAGAAGTTGAGAGATTGATATTAGATGATTTAGTTGCAGAAATAGTCGGTATCTAG 2808 0.4152 MDKIKSHHTNSKLHLPQGKDQIPKQRQHPDLSPDSSSSSGGVADKDSFSFKFGWKSSKQSVGTPIKKLLAEEMSPVTQSKRSSPGVIARLMGLDGLPSQQSTNKQHKDLQKSTPLEKTRNRGTVNEGRSSRRSSRDQEEFKDVFEVSEIPKVESGRYSSSNLKVNEDEMSFIEQKFMDAKRLATYQDFQSSKDFHDTLEVLDSNKDLLLKYLKRPDSLFKKHLNDLQDTPFQSHSSHVESTNMENFEHDFNWRSDRETTQVNYNRFHQKQRDGYHGQFDKRRVMHNSPRSSKHQFKSSHEQGPVPTKIVVLKPNLGKLQNGTRIESSPCSPRSFMSEHGNHAEFPDVRFRGTEMYQKINLPDSARSYRHNSLESREIAKEVTRQMKNSLSNGCTLSSSSRFKGYTRNDSSSSVSGNESPEEITATSGDPFDLNKRSRRSPRSSESSVSREAKKRLSERWKMAHKSQEVQGTSRSSTLGDMLAFPGKRMKGTRFDSMTGGEGFYDKFARKGEPSEWVEPLGISSKDGWRDASIGSLSRSKSLPASATVFGNPRTYLCAEALRNDRYMVPKDLKRERRRATKTLDHRHGMTSRSTISGHKKSLSLVSLKQEVSEFSPDLNAVQNNLKINLEENAPNLEVLTPEAFDQTLRDRSAVNDDIKDAANENSEPSSDKDASAGSTGGISVLPEAPVPGLESPCCKDADQPSPISVLDPSFTDDLSSCSECFGSVSADLQGLRMQLQLLKLESEEHVEGPMLISSDEDGGEAAVGMLEGNALWRTEDSWESSYIIDVLSESAIIEARTDNVLEVWHSLESPVSLSVFEELEEKYNDRTICSKSERRLLFDRINSGIVKIHEQSTNPQPWMVNAALSFGSKRINGLQDGLFQMLGSQGKVEDDVLGKLLIVESQWLKLRDDIDVIGREVERLILDDLVAEIVGI* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2154 935 MobiDBLite consensus disorder prediction 400 474 - -
Tpr1g2154 935 MobiDBLite consensus disorder prediction 28 43 - -
Tpr1g2154 935 Pfam DUF761-associated sequence motif 83 101 IPR032795 -
Tpr1g2154 935 MobiDBLite consensus disorder prediction 70 140 - -
Tpr1g2154 935 MobiDBLite consensus disorder prediction 400 423 - -
Tpr1g2154 935 MobiDBLite consensus disorder prediction 1 43 - -
Tpr1g2154 935 Pfam Protein of unknown function (DUF3741) 173 217 IPR022212 -
Tpr1g2154 935 PANTHER AFADIN 18 933 - -
Tpr1g2154 935 MobiDBLite consensus disorder prediction 109 140 - -
Tpr1g2154 935 MobiDBLite consensus disorder prediction 431 464 - -
Tpr1g2154 935 PANTHER AFADIN 18 933 - -
Tpr1g2154 935 Pfam Domain of unknown function (DUF4378) 783 931 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2154 Tpr-Chr1 22851123 22857443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2154 61 933 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.883 2.84e-135 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2154 - - ccaj:109788117 1135.94