Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2141 ATGGTTTCCACTATTACGTGGATTCGCTACCTTAAATCCAAAGCCCAATACTCTCTCGCTCTCGGATACAAGAACCATAAAGGAGGTCATGTCAAAGACAATGAGCTAACGGATTTTCTTTTCAAGCACTTCTGGCATGGAAAGATGACCTTCTTGCACTGGAATAAAGGAGAGGAGATGGCCCCTATTATTGCTGGAAATGGAGCAACTCTTCTTGTTCGGAGAATACCAATTCCAGACCCAAGACATGTTTATGTAGGAGATGTTGTGGTCTTGAAGAACCCTGAAAAGCCAGACGACTATCTAGTCAGAAGATTAGCTGCGACTGAAGGTTATGAAATGGCTTCTACTGATGAAAAGGATGAATCGTTTGTTCTTGACAAGCATCAATGTTGGGTAGTGGCTGAAAATGAAAAATTGAAAGCCAAGGAAGCAATTGATAGTCGAACATTTGGTCCAGTTCACATGACCAACATCGTAGGCAGAGTCCTATACTGCCTGCGAAATGCTGTAGACCATGGCCGTGTACAGAACAGTCCTTTCAGCATGCAAAACGACTCACCAGTGTTGGAAGTGGAACTCGATGTTGATGAGATGGCAAAAAGTCACAAAGCCTGA 618 0.4337 MVSTITWIRYLKSKAQYSLALGYKNHKGGHVKDNELTDFLFKHFWHGKMTFLHWNKGEEMAPIIAGNGATLLVRRIPIPDPRHVYVGDVVVLKNPEKPDDYLVRRLAATEGYEMASTDEKDESFVLDKHQCWVVAENEKLKAKEAIDSRTFGPVHMTNIVGRVLYCLRNAVDHGRVQNSPFSMQNDSPVLEVELDVDEMAKSHKA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2141 205 SUPERFAMILY LexA/Signal peptidase 57 175 IPR036286 -
Tpr1g2141 205 Gene3D Umud Fragment, subunit A 48 179 - -
Tpr1g2141 205 PANTHER OSJNBA0068L06.9 PROTEIN 1 205 - -
Tpr1g2141 205 CDD S26_SPase_I 56 163 IPR019533 GO:0004252|GO:0006465
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2141 60 180 MADS-box Gene Family AT1G29960 29.134 8.40e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2141 - - ahf:112738901 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2141 1 22537517 22547303 Tpr1g2141 1 22537517 22547303 ECH