Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2137 ATGGGCTCTGAAGGTTCACAAATTCGGGTTTGGTTTGAGATTTTGTTGATTTCGAAAGTTGGATCCTTTACTGCTCGAAAAAGTCAGACAAACCGTGAAGGTGAAGGTGAAAACATGGAGGCAGAAGAAGATGCCCTGATTGGATTCTGGAGTGCATTTGGTTGGTTGGATGGAATGACTGTTTTCATTGCTTTGTTGTCTGAATATGTGGTGGATACAATTGAGGTTTTAAGAAGTGATTGCGGTAAAGGTCGCGGTTGCGTTATTACCTTTGCTATTGCCGTCATTGGAACCAAGATCACCTTCTATTATTGTTTAAATCTAATACAGAACCCTGGAGGAAAGAAGATGTATATGTATCTTTATGTTCATGTGCCTGCAACAATGATCTCTTTGAGTTAG 402 0.4005 MGSEGSQIRVWFEILLISKVGSFTARKSQTNREGEGENMEAEEDALIGFWSAFGWLDGMTVFIALLSEYVVDTIEVLRSDCGKGRGCVITFAIAVIGTKITFYYCLNLIQNPGGKKMYMYLYVHVPATMISLS* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2137 133 PANTHER VACUOLAR CATION/PROTON EXCHANGER 31 97 - -
Tpr1g2137 133 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 31 97 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2137 Tpr-Chr1 22472029 22475780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2137 39 91 Antiporters AT3G51860 54.717 1.20e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2137 K07300 - tcc:18590500 65.0846