Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2136 ATGACCAAGTATAATGTCTTTGTGTTTTTATTTTTTGCATCAATAATTTCTTTTGTGTGTGATGCCATTGAAAGTGATGATGAAAGCAGTAAACTTCACATTGTATACATGGGCTCTCTTCCTAAAGAACCATCATATTCGCCAACTTCTCACCATATTAGCTTGTTGCAACAAGTTATCGATGATAGTGACATACAAAATTGCTTAGTTCGAAGTTACAAGAGGAGTTTCAATGGTTTTGCCGCTATGCTCAACGATCAACAAAGGATAAAACTTTCCGGCATGAGAGGTGTGATCTCAGTTTTTCCAAGCCAAGAGTACCACCTTAAAACCACAAGGTCGTGGGACTTTCTTGGTTTACCTCAATCAATCAAACGAACCAAAACTATTGAAAGTGATTTGGTGATCGGAGTCATAGATGGTGGAATTTGGCCAGAATCTGAAAGTTTCAACGATATAGGTCTTGGTGCTATTCCAAAAAAGTGGAAAGGAGATTGTGCAGGCGGACGTAACTTCAGTTGCAACAAGAAGATCATTGGAGCACGATTTTACGGTTTTAATGATGATAGTGCAAGAGACTCAGATTTTCATGGAACTCACACATCTTCAACAGCAGGTGGAAGGGAGGTGAATGGTGTGAGCTTTAATGGTCTTGCAAATGGAACTGCAAGAGGTGGAGTCCCAAATTCAAGGATTGCTGCATACAAAGTATGCAACAATCAAGGTATGTGCACCGGTCAAGCTATTTTATCTGCATTTGATGATGCCATTGCAGATGGAGTTGATGTCATTACCATATCTATGGGTAGACCAGGAATCATTAATTTTTTCGATGACCCTATTTCCATCGGTTCTTTTCATGCCATGGAGAAGGGAATACTCACAGTGCAAGCTGCAGGAAACGATGGTCCTAGCCCTAGTACTGTTTCCAGTTTTGCACCTTGGTTATTCACTGTTGCCGCAACTACCATAGATCGTCAATTCATTGATAAGCTCATTCTTGGAAATGGAAAGACGTTTATTGGTATGTCAATTAATATTTTCCCTTCAAATGGAACCAAATTTCCAATTGCCGTGCGTAATGCCCAAGCTTGCTCTGCTGGAGGAAATGTAACCCCTGAAAAGTGTGATTGTATAGACAAAAATATGGTTAACGGTAAGCTTGTTTTATGCGGAGCAAGCGGAGGTGAAGGAACAGCTTATGCCAATGGTGCAATTGGTTCGATCATTAATAGTACAGACTTTAGTTTTGATAAAGCTTCTGTCACTGATAAGCCTTCACTTAACTTGGAAACAAAGGACTTTGTTCATGTTCAATCTTATACAAATTCCACTAAATACCCTGTAGCTGAAATTTTAAAGAGTGAGATCTTCCATGACAACAATGCTCCTAGAATCGCCTCATTCTCTTCTCGGGGCCCAAATAATTTAGTTCTAGAAATTATGAAACCAGATGTAAGTGCCCCAGGAGTGAATATTTTGGCTGCAGTTCCACCTCAAAAATTATACTCAGATGTTATGGTGAAATACTACCTATTATCTGGAACCTCTATGGCATGTCCTCATGTTGCTGGAGTTGTTGCATATGTGAGATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACCACAAAACCAGTGAAGAAGAGTGATGATGATTGGGCAGGTGAGTTTGCTTATGGTTCTGGGAATATCAATCCACAACAGGCCATTCACCCAGGACTTGTTTATGACATCTCTAAGGAAGATTATGTCCAAATGCTATGTAATTATGGGTATGATGCTAACAAAATTAAACAGATTAGTGGAGATAACTCAAGTTGTGATGGAGCTTCCAAAAGAGCCATGGTTAAAAATATAAACTATCCAGCAATGGTGATTCCTGTTAGGCCTTATAACAAGAATTTCCGTGTCAAAATTCATAGAACAGTCACAAATGTTGGCTTTCCAAACACAACCTACAAGGCTACTCTCATCAATCATAATCCAAAAATCAAGATTATGGTGAAACCAAAACAACTTTCATTTAGATCATTAAATGAAAAACAATCATTTGTTGTCACTGTTGTTGGGGGAGCAAAATTAAATCAAACTGTGTTTTCCTCATCACTTGTATGGTCTGATGGTACCCACAATGTCAAGAGTCCCATCATTGTACAAATACTTCCTTCAATATAA 2196 0.3893 MTKYNVFVFLFFASIISFVCDAIESDDESSKLHIVYMGSLPKEPSYSPTSHHISLLQQVIDDSDIQNCLVRSYKRSFNGFAAMLNDQQRIKLSGMRGVISVFPSQEYHLKTTRSWDFLGLPQSIKRTKTIESDLVIGVIDGGIWPESESFNDIGLGAIPKKWKGDCAGGRNFSCNKKIIGARFYGFNDDSARDSDFHGTHTSSTAGGREVNGVSFNGLANGTARGGVPNSRIAAYKVCNNQGMCTGQAILSAFDDAIADGVDVITISMGRPGIINFFDDPISIGSFHAMEKGILTVQAAGNDGPSPSTVSSFAPWLFTVAATTIDRQFIDKLILGNGKTFIGMSINIFPSNGTKFPIAVRNAQACSAGGNVTPEKCDCIDKNMVNGKLVLCGASGGEGTAYANGAIGSIINSTDFSFDKASVTDKPSLNLETKDFVHVQSYTNSTKYPVAEILKSEIFHDNNAPRIASFSSRGPNNLVLEIMKPDVSAPGVNILAAVPPQKLYSDVMVKYYLLSGTSMACPHVAGVVAYVRSFHPDWSPAAIKSAIMTTTKPVKKSDDDWAGEFAYGSGNINPQQAIHPGLVYDISKEDYVQMLCNYGYDANKIKQISGDNSSCDGASKRAMVKNINYPAMVIPVRPYNKNFRVKIHRTVTNVGFPNTTYKATLINHNPKIKIMVKPKQLSFRSLNEKQSFVVTVVGGAKLNQTVFSSSLVWSDGTHNVKSPIIVQILPSI* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2136 731 CDD PA_subtilisin_like 332 452 - -
Tpr1g2136 731 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 32 727 - -
Tpr1g2136 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 110 IPR037045 -
Tpr1g2136 731 SUPERFAMILY Subtilisin-like 113 577 IPR036852 GO:0004252|GO:0006508
Tpr1g2136 731 Pfam Peptidase inhibitor I9 33 109 IPR010259 -
Tpr1g2136 731 ProSiteProfiles Serine proteases, subtilase domain profile. 114 577 - -
Tpr1g2136 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 727 IPR045051 -
Tpr1g2136 731 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Tpr1g2136 731 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Tpr1g2136 731 PRINTS Subtilisin serine protease family (S8) signature 514 530 IPR015500 -
Tpr1g2136 731 Pfam Fibronectin type-III domain 625 725 IPR041469 -
Tpr1g2136 731 Gene3D - 594 728 - -
Tpr1g2136 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 515 525 IPR023828 -
Tpr1g2136 731 CDD Peptidases_S8_3 107 549 IPR034197 -
Tpr1g2136 731 Gene3D Peptidase S8/S53 domain 133 590 IPR036852 GO:0004252|GO:0006508
Tpr1g2136 731 Pfam Subtilase family 132 554 IPR000209 GO:0006508|GO:0008236
Tpr1g2136 731 Gene3D - 325 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2136 Tpr-Chr1 22462101 22466059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2136 22 728 Subtilisin-like Serine Gene Family AT5G59100 50.347 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2136 - - mtr:MTR_1g006990 1025.39