Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2134 ATGGCCAATGAGCAAATCCAAGTGCTAAATAAACTTGATGTAGCAAAAACACAATGTTACCATTTCACAGCAATTATCATAGCTGGTATGGGATTCTTCACCGATGCCTACGATCTATTCTGCGTATCACTTGTCACAAAGCTACTCGGTCGCATATACTACCATGTCAATGGAGCTGAAAACCCAGGGACATTACCACCAAATGTTGCAGGAGCGGTTAACGGCATTGCTTTTGTTGGAACACTTTTCGGACAACTTTACTTCGGATGGCTCGGAGACAAATTAGGCCGTAAAAAAGTCTATGGCTTGACATTAGCCCTTATGGTTTTATGTTCCTTATGTTCAGGTCTTTCTTGTGGAACTGGACCAAAAGCTGTGATGACAACTCTTTGTTTTTTTAGATTTTGGCTTGGTTTTGGTATTGGTGGTGATTATCCACTTTCTGCTACTATTATGTCAGAATACTCAAATAAAAAGACACGTGGCGCATTTATAGCTGCAGTTTTTGCTATGCAGGGTTTTGGAATTTTAGCAGGTGGTGCATTTGCTATGTTAGTTTCAACTGCATTTAAATCAAAATTTGATGCACCAGCTTACATGGTTGATCCATTAGGTTCAACGGTTCCTGAAGCCGATTATGTTTGGAGGATAATCGTAATGTTTGGAGCAATTCCAGCTGCAATGACTTATTATTTAAGATCTAAGATGCCTGAAACTGCACGCTACACCGCACTTGTTGAGAAGAATATTGAAAAAGCTGCAGCAGATATGTCTAAGGTTTTGAACACAGATATTAAAGCTGAACCTACAATAGTTGTTGATCCTATTCAAGAGAAGAATCAATTTGGACTTCTTTCGAAAGAGTTTATGTCTCGTCATGGTTTGCATTTACTCGGAACAACATCCACATGGTTTTTGCTTGATGTCGCATTTTATAGTCAAAATCTTTTCCAGAAAGATATCTTCAGTGATGTTGGTTGGATTCCAGCTGCAAAGACGATGAATGCACTCGAAGAGGTTTTTAGAATTGCGAGAGCACAAACTCTTATTGCATTAGGCAGTACAGTTCCTGGTTACTGGTTCACGGTTGCATTCATAGATAGAATTGGAAGGTTCACTATTCAGTTAATGGGATTCTTTTTCATGACACTTTTTATGTTCACTCTTGCTATTCCTTATGATTACTGGACACTTAAAGAAAACAGAAACGGGTTTATTGTGCTCTATTCCTTAACTTTCTTCTTTGCGAATTTCGGGCCTAATGCTACCACATTTGTTGTGGCAGCCGAGATTTTCCCAGCTAGGTTTAGATCAACTTGTCACGGAATATCGTCTGCATCAGGGAAATTAGGAGCGATGGTTGGCGCATTCGGGTTTTTATATTTGGCACAGAATCAGGACCCGAGTAAAGCCGATGCAGGCTACCCTGCAGGTATTGGTGTGAGAAACTCATTGCTTTTGTTAGGTGCGATTAACATTTTGGGATTCTGCTTTACTTTCTTAGTTCCTGAGACAAAAGGAAAATCTCTTGAAGAAATATCAGGTGAGGAAATTGACGAAATTGTTGATACTACCAGTCATCAAAGCAACAATAGTGGCAGATTGATGTCATATCCTTAG 1620 0.3951 MANEQIQVLNKLDVAKTQCYHFTAIIIAGMGFFTDAYDLFCVSLVTKLLGRIYYHVNGAENPGTLPPNVAGAVNGIAFVGTLFGQLYFGWLGDKLGRKKVYGLTLALMVLCSLCSGLSCGTGPKAVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGAFAMLVSTAFKSKFDAPAYMVDPLGSTVPEADYVWRIIVMFGAIPAAMTYYLRSKMPETARYTALVEKNIEKAAADMSKVLNTDIKAEPTIVVDPIQEKNQFGLLSKEFMSRHGLHLLGTTSTWFLLDVAFYSQNLFQKDIFSDVGWIPAAKTMNALEEVFRIARAQTLIALGSTVPGYWFTVAFIDRIGRFTIQLMGFFFMTLFMFTLAIPYDYWTLKENRNGFIVLYSLTFFFANFGPNATTFVVAAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDPSKADAGYPAGIGVRNSLLLLGAINILGFCFTFLVPETKGKSLEEISGEEIDEIVDTTSHQSNNSGRLMSYP* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2134 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 521 - -
Tpr1g2134 539 SUPERFAMILY MFS general substrate transporter 13 514 IPR036259 -
Tpr1g2134 539 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 1 521 - -
Tpr1g2134 539 Gene3D MFS general substrate transporter like domains 20 531 IPR036259 -
Tpr1g2134 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 507 IPR020846 GO:0022857
Tpr1g2134 539 CDD MFS_PhT 25 506 - -
Tpr1g2134 539 TIGRFAM 2A0109: phosphate:H+ symporter 12 516 IPR004738 GO:0005315|GO:0006817|GO:0016021
Tpr1g2134 539 Pfam Sugar (and other) transporter 26 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2134 Tpr-Chr1 22442114 22444381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2134 1 515 Inorganic Solute Cotransporters AT2G38940 79.457 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2134 K08176 - gmx:100786638 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2134 1 22442114 22444381 Tpr1g2134 1 22442114 22444381 ECH
Tpr1g2134 1 22442114 22444381 Tpr6g3460 6 37339443 37343341 PCT