Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2132 ATGGATTTTGTTGATTCTTCATTTTTCCAATTTCAATACCAAAACCTTAACACTTCATTTTCAAATTCATCTTCTTTTTCAGAAAACATTTCATGGGATGATTTCTTTTTCTCCAATGAAGACAACACCAACAATAACAATCACAATAGCAACACTTTTCCCTTGAACTCCACTCATCAAAACACACAAGAAATTTCATTATCAAATTCCAATTCTAACACTTCAAACTCTCAAATAAGTTCAGAATCACAAGAAGTTTCATCTAATTCTTCAACTCAAGTTATAGAAACACAATCATCATCATCATTATCATCCCCTAAGAGGCCATACAGAGGAGTTAGGAGAAGACCATGGGGGAAATTCGCGGCCGAGATAAGAGACTCAACAAGAAATGGTGTTAGAGTTTGGATTGGAACATTTGATACCGCTGAAGCAGCTGCTTTAGCTTATGATCAAGCAGCTTTAACAACAAGAGGTTCAATGGCAGTGTTGAATTTTCCTGAACAAGTTGTGAGAGAATCATTGAAAGATATGGTGATTAACAAGTCATGGGAAAATGATGGTTCTTCTCCTGTTTTAGCACTTAAGAGGAAACACACTTTGAAAAGAAAATCTAAAGCAAGTAATAGCAAAAAGACCAAAAGGGGAGAAAAGGAATTAATGGAGAATAATGTTGTTTCAGAAAATGTGTTGGTTTTGGAAGATTTGGGTTCTGAATATTTAGACCAACTTCTTAGTTTAAGTACTTCTTCTCAAGTCTTTTGTTAG 768 0.3451 MDFVDSSFFQFQYQNLNTSFSNSSSFSENISWDDFFFSNEDNTNNNNHNSNTFPLNSTHQNTQEISLSNSNSNTSNSQISSESQEVSSNSSTQVIETQSSSSLSSPKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALTTRGSMAVLNFPEQVVRESLKDMVINKSWENDGSSPVLALKRKHTLKRKSKASNSKKTKRGEKELMENNVVSENVLVLEDLGSEYLDQLLSLSTSSQVFC* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2132 255 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 11 248 - -
Tpr1g2132 255 MobiDBLite consensus disorder prediction 199 220 - -
Tpr1g2132 255 CDD AP2 110 169 IPR001471 GO:0003700|GO:0006355
Tpr1g2132 255 SMART rav1_2 109 173 IPR001471 GO:0003700|GO:0006355
Tpr1g2132 255 ProSiteProfiles AP2/ERF domain profile. 109 167 IPR001471 GO:0003700|GO:0006355
Tpr1g2132 255 MobiDBLite consensus disorder prediction 61 113 - -
Tpr1g2132 255 MobiDBLite consensus disorder prediction 61 107 - -
Tpr1g2132 255 SUPERFAMILY DNA-binding domain 110 168 IPR016177 GO:0003677
Tpr1g2132 255 Pfam AP2 domain 110 159 IPR001471 GO:0003700|GO:0006355
Tpr1g2132 255 Gene3D AP2/ERF domain 109 169 IPR036955 GO:0003700|GO:0006355
Tpr1g2132 255 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Tpr1g2132 255 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Tpr1g2132 255 PANTHER DNA-BINDING DOMAIN 11 248 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2132 Tpr-Chr1 22414134 22415210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2132 79 251 AP2-EREBP Transcription Factor Family AT3G23240 53.179 3.20e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr1g2132 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2132 K14516 - gmx:100784784 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3464 6 37390623 37391911 Tpr1g2132 1 22414134 22415210 PCT