Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2131 ATGGAGGGAAATAGATCAATTTCAAACTCAACAAATGGAAATGGAAATGTAGATCAAATAAAGTATAGAGGAATTCGTAGGAGACCATGGGGAAAATTTGCAGCAGAGATTCGTGATCCAACAAGAAAAGGTACAAGAATATGGCTTGGAACATTTGATACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGCTGCTTTTCATTTTCGTGGTCATAGAGCTATTCTTAATTTCCCTAATGAATATCAAGCTCCTTCTAATTCGTCTTCTTCTTCTTCTTCATTACCTATGCCTCTTACATCTATGCCTCCTCCTAATCCTTCTTCTTCTTCTTCCTACTCTGTTGATGACATTAATTTTGAGTTTGAATTCTTCGATAATAAGTTGCTTCAAGAACTCCTTCAAGATGGAACACACAATAATTAG 426 0.3638 MEGNRSISNSTNGNGNVDQIKYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEEAARAYDAAAFHFRGHRAILNFPNEYQAPSNSSSSSSSLPMPLTSMPPPNPSSSSSYSVDDINFEFEFFDNKLLQELLQDGTHNN* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2131 141 MobiDBLite consensus disorder prediction 1 20 - -
Tpr1g2131 141 MobiDBLite consensus disorder prediction 1 18 - -
Tpr1g2131 141 MobiDBLite consensus disorder prediction 80 112 - -
Tpr1g2131 141 SMART rav1_2 21 85 IPR001471 GO:0003700|GO:0006355
Tpr1g2131 141 MobiDBLite consensus disorder prediction 80 97 - -
Tpr1g2131 141 PANTHER DNA-BINDING DOMAIN 6 106 IPR044808 GO:0003700|GO:0009873
Tpr1g2131 141 Pfam AP2 domain 21 72 IPR001471 GO:0003700|GO:0006355
Tpr1g2131 141 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Tpr1g2131 141 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 6 106 - -
Tpr1g2131 141 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
Tpr1g2131 141 ProSiteProfiles AP2/ERF domain profile. 21 79 IPR001471 GO:0003700|GO:0006355
Tpr1g2131 141 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Tpr1g2131 141 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Tpr1g2131 141 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2131 Tpr-Chr1 22386204 22386887 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2131 19 134 AP2-EREBP Transcription Factor Family AT3G23230 56.034 7.42e-39 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr1g2131 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2131 - - aip:107628225 144.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3466 6 37434937 37435500 Tpr1g2131 1 22386204 22386887 PCT