Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2126 ATGGAAGAGGAAATTTCAAAGGAGAAGAATGACAAACAAGAGTCACCAAAAGAAATCCGATACCGAGGAGTGAGGCGGCGTCCATGGGGAAAATATGCGGCCGAGATTCGCGACCCAGCTCGAAAAGGTACCCGTGTATGGCTAGGGACATTTCTCACGGCGGAAGAAGCTGCGAGAGCTTATGATCGTGCCGCCTTTGAAATGAGAGGTTCTTTAGCCATTCTCAATTTTCCACATGAGTATCCATTTCTCAACTCCTCTTCTTCATCATCATCGTTAGCACCCAATCCACATTTATCTTCTAGCTCGGAATCATTATTGCCTTCAAATTACCAAAATGAGCATGGAAAAGAAGTCATTGAGTTTGAATGTTTGGATGATAAATTGTTAGAGGAACTTCTTGATTGTGATGAGAGTGAAACTACCACTCACAAAAACTTGCCAAAGTAG 450 0.4289 MEEEISKEKNDKQESPKEIRYRGVRRRPWGKYAAEIRDPARKGTRVWLGTFLTAEEAARAYDRAAFEMRGSLAILNFPHEYPFLNSSSSSSSLAPNPHLSSSSESLLPSNYQNEHGKEVIEFECLDDKLLEELLDCDESETTTHKNLPK* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2126 149 PANTHER ETHYLENE RESPONSE FACTOR 10 138 - -
Tpr1g2126 149 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Tpr1g2126 149 MobiDBLite consensus disorder prediction 85 110 - -
Tpr1g2126 149 MobiDBLite consensus disorder prediction 1 21 - -
Tpr1g2126 149 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Tpr1g2126 149 PANTHER DNA-BINDING DOMAIN 10 138 IPR044808 GO:0003700|GO:0009873
Tpr1g2126 149 Pfam AP2 domain 20 70 IPR001471 GO:0003700|GO:0006355
Tpr1g2126 149 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Tpr1g2126 149 SUPERFAMILY DNA-binding domain 20 80 IPR016177 GO:0003677
Tpr1g2126 149 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Tpr1g2126 149 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Tpr1g2126 149 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2126 Tpr-Chr1 22279582 22280331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2126 17 138 AP2-EREBP Transcription Factor Family AT3G23230 61.789 5.96e-44 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr1g2126 AP2 6.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2126 - - gmx:100810414 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2126 1 22279582 22280331 Tpr1g2126 1 22279582 22280331 ECH