Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2117 ATGAGTACTAACTTGCATCAACTACTAAGAAGCCTTTGTTTGGAGAGTGATTGGAAGTATGCTATCTTTTGGAAGCTACAACAACACTGTGCTAGGATGATCTTGACATGGGAGGATGCTTACTATGACAGTCCTGATAATTGTGATTCTTCCCAAAGTGGTTGCGATTTTTCACAGGACCCTCTAGGATTATCTGTGGCAAAGATGTCGTATCATGCATATTCGTTAGGGGAAGGTATTGTTGGACAAGTAGCTGTTACTGGAAAGCATCAGTGGATCTGTGCAGATAATCAAGTTACAAGTTCCGGCCCATCTTTTAAGTTTGCTGATGGATGGCAATCTCAGTTTTCTGCTGGCATTAGGACAATTGCTGTTGTAGCTGTAGTCCCACTCGGAGTTGTTCAACTTGGTTCTTTAAATAAAGTTAGTGAAGACATAAGGGTTGTAACTCATATCAGAAGTCTCTTTTTGTCATCTCATGATCACACATTAGGTTACCTTCCTAGTCAAATCCAAAGTGTGAAACCCACCACACAGAAAACCATGACGTGCGAAACACTGAAAATGTTAATGCCCTTTCAATGTCCTCCGAATAACTATTCACCTCCTGCTGTGGCCAAGCATGAAGGGCCTGTAATTAACAGTGATCAAAGTTCCATCTTGCTTCAGTCAATGTCAAATATAATGACTGCGGAGGATCAGAAACTAGTAGGGACGAAGCCTGCAAATGAAAGGAAGTGTGAAGGGAACAGTAATAGCTGCAAAGATACTAGTTTGAAATCAGACAAAAACATCTCATCGTTATTACCTGATTCAGTTATGTATAATATTAGTGCCAATGATTTGATAAGTCCATCGGAAAACGGCAGAGCTGATACTGAGATGTTAAAGTTTCAGAGCATGTCTTGTTATGGGGATACCTCGTACACGTTGAAGTTCCCTGCTGGCTATGAGCTACACGAAGCACTTGGACCAGGTTTTCTGAAAGAGAGTAAATATTATGATTGGGCAGTACCAGAAAATCAGGATAGTAAAGCTGCTGAGATGTCGGATGAAATTAGCTGCAGTCAATTGACTTCTGAATCTCGTCCGGAGCATCTTTTGGAAGCAGTGGTGACCAAAGTTTGCCATAGTAATAATAATAAGGTTGATAACGAGTTATCGTTTTCTACATCAGTGCAGGATTCAATGGCCTCTGGAAGAAATCCTGGAGTTTCTATTCATACCGTCCGCACTATTAATTCTGAAGGCTATTCAATTGACCAACCATCTCATGTTAAAGAGGACAAGCATCATAGTTTGAGTTCATCAGGAATATGCGGTCTGATATCCCCTAAAAGTTTTTCTTCTACATGTCCTAGTTCATGTAGTAACCAGTTTGAGAGGTCTTCTGAACCGTCTAAAAACAGCAAAAAGAGGGCAAGGCCTGGGGAAAGTTGTAGGCCTAGACCAAGGGACAGACAGCTGATCCAAGACCGTATTAAGGAGTTACGAGAACTTGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTGTTGGAGTGCACAGTAAAGCACATGCTCTTTCTCCAAAGCATAACTAAGCATTCTGACAAGCTAAATATATTTACTGAAACAAAGACAAAGTCGCGTGATCACATGGATAAAGACATTCACGGACCCTCTGGTTATCAGCAGGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATCTGAAGGTTCATTCGATATTAGTAGAAAGTCATGGTAAGAATGGGCAGATGCTTGTTGAGATGCTTTGTGAGGAGTGCAACCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGATTGACGATTTTGAACGGTACAACTGAACCTCGTGGTGAGAAGACATGCATATGTTTTGTTGTTGAGGGACAAAACAACGTAAATTTACATAGGCTGGATATCTTGTGGCCGCTTGTTCAATTATTGCAGTCCAAGAGCACAGTGCATTCATGA 1983 0.4135 MSTNLHQLLRSLCLESDWKYAIFWKLQQHCARMILTWEDAYYDSPDNCDSSQSGCDFSQDPLGLSVAKMSYHAYSLGEGIVGQVAVTGKHQWICADNQVTSSGPSFKFADGWQSQFSAGIRTIAVVAVVPLGVVQLGSLNKVSEDIRVVTHIRSLFLSSHDHTLGYLPSQIQSVKPTTQKTMTCETLKMLMPFQCPPNNYSPPAVAKHEGPVINSDQSSILLQSMSNIMTAEDQKLVGTKPANERKCEGNSNSCKDTSLKSDKNISSLLPDSVMYNISANDLISPSENGRADTEMLKFQSMSCYGDTSYTLKFPAGYELHEALGPGFLKESKYYDWAVPENQDSKAAEMSDEISCSQLTSESRPEHLLEAVVTKVCHSNNNKVDNELSFSTSVQDSMASGRNPGVSIHTVRTINSEGYSIDQPSHVKEDKHHSLSSSGICGLISPKSFSSTCPSSCSNQFERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTVKHMLFLQSITKHSDKLNIFTETKTKSRDHMDKDIHGPSGYQQGSSWAMEVGGHLKVHSILVESHGKNGQMLVEMLCEECNHFLEIAEAIRSLGLTILNGTTEPRGEKTCICFVVEGQNNVNLHRLDILWPLVQLLQSKSTVHS* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2117 660 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 296 660 - -
Tpr1g2117 660 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 182 - -
Tpr1g2117 660 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 204 294 - -
Tpr1g2117 660 MobiDBLite consensus disorder prediction 465 487 - -
Tpr1g2117 660 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 156 IPR025610 -
Tpr1g2117 660 MobiDBLite consensus disorder prediction 459 487 - -
Tpr1g2117 660 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 296 660 IPR043561 GO:0003700|GO:0006355
Tpr1g2117 660 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 182 IPR043561 GO:0003700|GO:0006355
Tpr1g2117 660 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 204 294 IPR043561 GO:0003700|GO:0006355
Tpr1g2117 660 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 474 523 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2117 Tpr-Chr1 22161302 22167615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2117 1 656 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.633 1.45e-143 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2117 - - cam:101504684 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2117 1 22161302 22167615 Tpr1g2117 1 22161302 22167615 ECH