Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2104 ATGGAAGGAAACTATATGAATAGAAACACAACAACTACTCATAGAGATCATGAACATCTTCATCAACATCATCATCATAACTTGAGATTTGAGGAGCATACATGGGGAACATCATGGCCAGCAAGAAACTATGCTTGTAGTTTTTGCAAAAGAGAGTTTAGGTCAGCTCAAGCATTAGGTGGACATATGAATGTTCATAGAAGAGATAGGGCAAGATTAAGATCATCATTAATATCTTCTTGGGTTAATCCTGATCAATGCCCTAATACTAATAATAATACTAAACCTAACCCTACTATTACTACTACTACTACAACTAATTCTCTTCTTTCACCTTCTACACAATCTCCTTTATCTAATGATGAGATTTTCAATGTTTCTTCAAACCCTTATCTCACTTTATCATCTTCTTCTTCTTCACCATTCTTAGCTCATACTAGCCATGATGATAAGAAACCAAGACTCACTACACCTTCTCTATCTCTTCCTCTTTTGAATCCTCAAAGAAGACAAATTATGAAAAGCTATGAAGAAGTGAAGAAGCATAATGTTTTGATGAATAGTGAGCAAAACATTAAATTGGAGTTAGGAATAGGGTTTGTTGAACATCAAGAGGAAAAGTTAGATTTGGAGCTTAGACTCTAG 645 0.3442 MEGNYMNRNTTTTHRDHEHLHQHHHHNLRFEEHTWGTSWPARNYACSFCKREFRSAQALGGHMNVHRRDRARLRSSLISSWVNPDQCPNTNNNTKPNPTITTTTTTNSLLSPSTQSPLSNDEIFNVSSNPYLTLSSSSSSPFLAHTSHDDKKPRLTTPSLSLPLLNPQRRQIMKSYEEVKKHNVLMNSEQNIKLELGIGFVEHQEEKLDLELRL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2104 214 PANTHER OS07G0101800 PROTEIN 6 214 - -
Tpr1g2104 214 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 6 214 - -
Tpr1g2104 214 MobiDBLite consensus disorder prediction 1 20 - -
Tpr1g2104 214 SUPERFAMILY beta-beta-alpha zinc fingers 41 70 IPR036236 -
Tpr1g2104 214 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 71 IPR013087 -
Tpr1g2104 214 ProSitePatterns Zinc finger C2H2 type domain signature. 46 66 IPR013087 -
Tpr1g2104 214 Pfam C2H2-type zinc finger 44 68 - -
Tpr1g2104 214 SMART c2h2final6 44 66 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2104 Tpr-Chr1 22022931 22023575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2104 8 214 C2H2 Transcription Factor Family AT3G23130 38.942 7.62e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2104 - - mtr:MTR_1g070265 226.098