Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2096 ATGAGAGACATGTATGAAAAACAATCATCATCATCACCTGAAGTTTCAAATTATGCATCAAGTAGTGGCTTATCTGGAGATGATAAAGAGATTGGTTATAGAGCTACAACATTAAATCATTCATATCTTTTGCCCAACATATCTTCCCTTCACAAATTACCTATCAAAATTGACCTCAATTTTGCTCGCATGGTAATGGCAGAGGTGGTGGGAACGTTTATTTTGATGTTTTGTGTATGTGGGATCATTGCTAGCAGCAAACAAACTCAAAATAGTGCAGTAGGACTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTGGTTGTAATAATCTTCTCTATCGGCCCAATTTCTTGTGCACATGTTAACCCAGCTGTTACAATAGCCTTTGCAACAATTGGTCAATTTCCATGGTTCAAGGTTCCAATTTACATAATAGCACAAACAATTGGTTCTTTGATGGCAACATATATTGGTAGTCTTATCTATGGCATAAAATCAGATATTATGATGACTCAACCACTCCAAGGTTCCAACTCTGCCTTTTGGGTGGAGCTTATTGCAACATTCATCATCATGTTTTTGGTTACAGCTTTGACATCTGAACCTCAATCAGTGGGTCATTTATCTGGGTTTGTTGCTGGAATTGCAATTGGGCTTGCTGTACTAATCACAGGCCCTGTTTCAGGTGGATCAATGAATCCAGCAAGATCACTAGGTCCAGCAATTATATCATGGAAATTTAAGGACATTTGGATATACATCTTAGCCCCAAGTGGAGGAGCTGTGACAGGAGCTTTAACGTTTCGTTTCCTACGTCTTCAAGACCAACATTGCAATTCCCCAAACATGACTGAAGTTGGTCATCCCATACCCTATTGTGCAAGAAGAAGTGGCAACATGATTTTGCTGGTAGAGAAAAATTGGAGTGTATTATGTGACAGAATAGAAGGGTTTAGACAAAGATATGTCTTAAGAACAAGAGTATCAGATGGTGTTTATCATAAGTTGTCAATGTAA 1020 0.3853 MRDMYEKQSSSSPEVSNYASSSGLSGDDKEIGYRATTLNHSYLLPNISSLHKLPIKIDLNFARMVMAEVVGTFILMFCVCGIIASSKQTQNSAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGQFPWFKVPIYIIAQTIGSLMATYIGSLIYGIKSDIMMTQPLQGSNSAFWVELIATFIIMFLVTALTSEPQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAIISWKFKDIWIYILAPSGGAVTGALTFRFLRLQDQHCNSPNMTEVGHPIPYCARRSGNMILLVEKNWSVLCDRIEGFRQRYVLRTRVSDGVYHKLSM* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2096 339 MobiDBLite consensus disorder prediction 8 23 - -
Tpr1g2096 339 PRINTS Major intrinsic protein family signature 63 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g2096 339 PRINTS Major intrinsic protein family signature 103 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g2096 339 PRINTS Major intrinsic protein family signature 140 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g2096 339 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g2096 339 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g2096 339 PRINTS Major intrinsic protein family signature 252 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g2096 339 PANTHER AQUAPORIN NIP7-1-RELATED 12 284 - -
Tpr1g2096 339 ProSitePatterns MIP family signature. 121 129 IPR022357 -
Tpr1g2096 339 CDD MIP 63 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g2096 339 SUPERFAMILY Aquaporin-like 59 278 IPR023271 -
Tpr1g2096 339 Gene3D Glycerol uptake facilitator protein. 48 286 IPR023271 -
Tpr1g2096 339 PANTHER AQUAPORIN NIP2-1 12 284 IPR034294 -
Tpr1g2096 339 Pfam Major intrinsic protein 60 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g2096 339 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2096 Tpr-Chr1 21874817 21878394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2096 58 283 Major Intrinsic Protein MIP AT4G10380 41.304 1.14e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2096 K09874 - mtr:MTR_1g070385 501.901