Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr1g2091 | ATGGCTCCAAAATCTTCCACCGCTTCACATCCTACTTACGAAGAGATGATTAAGGAAGCAATTGTGACACTGAAGAAGAAAACAGGTTCAAGTCAATTTGCGATTGCGAAATTCATCGAAGAGAAACACAAAAATCTTTCTCCAAATTTCAAGAAACTATTGCTTCAAGCTTTGAAGAAAAACATTGCTTCTGGAAAACTTGTTAAGGTTAAAGGTTCATTCAAACTTTCTCCGGCGGCTAAAGCTTCTGAGCCGAAGACAAAGCCCGCCATTGCGAAGCCGAAAACAAAGCCAGCTGCTAAAGTAACGTCGATGAAGGCCAAGCCAGCCGCTAAGCCAAAGACGAAAGCTGCTGCTGCCAAGCCCAAAGCTGTTGTTGCTAAGCCCAAAGCTGCTGCTGTAAAGCCCAAGGCAGGTGTGAAACCTAAGACTGCGGAGAAACCTGTCAAGGCTGCAAGGACTTCAACGAGGACGACGCCGGGGAAGAAAGTTGTGGCTTCGAAGGCAGTAGTGAAGAAAGCTGTGGCTGCTAAGAAAGCTCCGGTGAAGAGAAAAAGTGTGAAGTCTCCGACGAAGAAAGTTTCGACGAAGAGAGGAGGAAGAAAATGA | 609 | 0.4598 | MAPKSSTASHPTYEEMIKEAIVTLKKKTGSSQFAIAKFIEEKHKNLSPNFKKLLLQALKKNIASGKLVKVKGSFKLSPAAKASEPKTKPAIAKPKTKPAAKVTSMKAKPAAKPKTKAAAAKPKAVVAKPKAAAVKPKAGVKPKTAEKPVKAARTSTRTTPGKKVVASKAVVKKAVAAKKAPVKRKSVKSPTKKVSTKRGGRK* | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr1g2091 | 202 | SUPERFAMILY | "Winged helix" DNA-binding domain | 6 | 88 | IPR036390 | - | |
| Tpr1g2091 | 202 | MobiDBLite | consensus disorder prediction | 77 | 202 | - | - | |
| Tpr1g2091 | 202 | MobiDBLite | consensus disorder prediction | 177 | 202 | - | - | |
| Tpr1g2091 | 202 | PANTHER | HISTONE H1.1 | 5 | 202 | - | - | |
| Tpr1g2091 | 202 | SMART | h15plus2 | 7 | 73 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
| Tpr1g2091 | 202 | CDD | H15 | 7 | 89 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
| Tpr1g2091 | 202 | Gene3D | - | 5 | 89 | IPR036388 | - | |
| Tpr1g2091 | 202 | PANTHER | HISTONE H1 | 5 | 202 | - | - | |
| Tpr1g2091 | 202 | Pfam | linker histone H1 and H5 family | 10 | 77 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
| Tpr1g2091 | 202 | ProSiteProfiles | Linker histone H1/H5 globular (H15) domain profile. | 9 | 78 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr1g2091 | Tpr-Chr1 | 21760856 | 21761862 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr1g2091 | 1 | 76 | Single Myb Histone (SMH) Gene Family | AT1G72740 | 32.895 | 9.25e-08 | 49.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr1g2091 | K11275 | - | gmx:100795994 | 140.198 |
Event-related genes