Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2082 ATGGAAGAGGTTGAACAAGCTAACAAAACAGCTGTTGAAAGCTGTCATAGAGTTCTGAGTATGTTGTGTCAACCAAGGGATCAAGTTCATCATAGGAATCTAATGGTGGAAACTGGTGAAGCTGTGAATAGGTTCAAGAAAGTTGTGTCTTTGCTTCATAAAAGTTTGGGTCATGCCAGAGTTAGGAAGAGTAAAACTCATCAACAAGTCCCTTTTCCTCAAAATGTTTTCTTAGATAATCCAAATTGCCAAAAAACCATTAACCATCAAACCAAAAATCTTCACTTTACTCAAACTAGCCACCCTGAAAATTCAGTTCAGGAACTTGGTTTAACCATAAGAAATCCACTCTCTCTTGGAAACCCTTCTTTGGAATTGAGCTCGAACGGGAAAAGTCCTCTTCATCTTGCTCAACCGGCTGCTGCGTCATCTCACTATCACTTCATTCAGCAGCAACAACAGCAGCAGCAACAAAGGTTTTTGCTGCATCAGCATCAACAGCAGCAACAGCAGCAGCAGCAACAAATGAAGCATCAAGCTGAAATGATGTTCCGAAGGAACACTAGCGGCATAAACCTTAATTTTGACAACACCACTAGCGGCACACCAACAATGTCGTCTACTAGATCTTTCATTTCGTCGTTGAGCATAGACGGAAGTGTAGCTAACATGGACGGAAGTTCATTTCATTTGATAGGAGCTCCAATCTCTTCGGATCAGAACTCACAACAGCACAAGAGAAAATGTTCTGCTAGAGGCGATGAGGGAAGTCTGAAATGTGGTAGCAGTTCTAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCGATTAAGGTGCCTGCAATCAGCAACAAGCTTGCAGATATCCCTCCTGATGATTACTCATGGAGGAAGTATGGGCAGAAGCCGATCAAGGGCTCTCCTCACCCTAGGGGATATTACAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTACTATGCTGATTGTTACCTATGAAGGTGATCATAACCACCCCAAGGTACGACACAATCTGCAAATGCATGAACTGTATGGAGAGGCCCGTCATTTAATTTGTCAAGACCGCTATGTGATTGATTGGCTTGAGATGTTTCTGTACATATTTCAAGTGATGCAAGCAGGGCTGCAGATTTTGGCTTTTGGCTTTTGGATAGCTTGGTTGATGAGTCGTTTATTTAGAGGTGGTGTTAATCAAAGTTGCTGGTTAAGTGCAGGAATATGTAAAATTGGTAGTTTCAATTCGTAA 1305 0.4261 MEEVEQANKTAVESCHRVLSMLCQPRDQVHHRNLMVETGEAVNRFKKVVSLLHKSLGHARVRKSKTHQQVPFPQNVFLDNPNCQKTINHQTKNLHFTQTSHPENSVQELGLTIRNPLSLGNPSLELSSNGKSPLHLAQPAAASSHYHFIQQQQQQQQQRFLLHQHQQQQQQQQQQMKHQAEMMFRRNTSGINLNFDNTTSGTPTMSSTRSFISSLSIDGSVANMDGSSFHLIGAPISSDQNSQQHKRKCSARGDEGSLKCGSSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGDHNHPKVRHNLQMHELYGEARHLICQDRYVIDWLEMFLYIFQVMQAGLQILAFGFWIAWLMSRLFRGGVNQSCWLSAGICKIGSFNS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2082 434 ProSiteProfiles WRKY domain profile. 288 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g2082 434 SUPERFAMILY WRKY DNA-binding domain 291 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g2082 434 Pfam WRKY DNA -binding domain 295 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g2082 434 Pfam Plant zinc cluster domain 246 291 IPR018872 -
Tpr1g2082 434 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 354 IPR044810 GO:0003700
Tpr1g2082 434 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 354 - -
Tpr1g2082 434 Gene3D WRKY domain 277 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g2082 434 SMART WRKY_cls 293 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2082 Tpr-Chr1 21688991 21691824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2082 1 354 WRKY Transcription Factor Family AT2G30590 58.005 7.93e-119 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr1g2082 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2082 - - gmx:100170681 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2082 1 21688991 21691824 Tpr1g2082 1 21688991 21691824 ECH