Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2063 ATGACTAGAACGGAAAGTATAGACATTGTAACCGATCAGAATCTTGAAAAACATATTCACAAACACATGGGGTGCATGGCTGGTTTCTTTCAAATCTTCGACCGTAACCACATTCTCTCCGCCAAACGCATCTACTCCACCAAAAGACTCCCTCCGCCATCGCCGAAAACACCGGAAAAAGACGGTGGCTCACCGGTGTTATCAGCACCGTCACCTGTTAAAGAGATCCAACAATGTGAAGCAAAACAGAACCTTCCTGTTCTGGAACTCAAGGAAGGTACGAGGTCTTCATGGAAATTCTCAAGAGAAGCTCCTAGACTGTCTCTTGATAGCAGAGCAGTTGTTGATGCCAAAGGAGCACTTCATCCAAGAGAGATCCGAACAAACACAACGGTAAATCTCGATAACGGCGGCGAGAAACAGCGTCGTTCCACCAGCAGTGTTATTGTTAGGCTAATGGGTCTTGACTCATTACCAACGGATTCCGCCGCGAAGCTTCAGAGATCCGCGTCGGAGTCCAGAGTTTCCAGAGATCGGTTCTCTGAGTCTAAGATTAAGGCCAACAATTACACTCAACGTAGCAATGTGGGTTTGAGCCAGATGAATAATCATAATCATAATCATACCAATTCTAATGCTGTTAATGTTAATGCTAATAATGTTAATTTTGTTAATTCTTATGGTACCAATGATAATCGATTGTGGAATGGTAGAGGTTCAGAGGGAGGTAAAGGTTCACTTCCTATGAAGCAGAGTAAGGGAACAATAATGGTACAAAAGAAGAGTTTCTATGATTCTACTGATTTCTTCCCTGAACCAAAGCACAATGTTTCGATCTATGGAGAGATTGAAAAAAGGTTGAAGATGCGAGGGATTAATCAACCTTCTCAAGATCTTGACACACTCAAGCATATCTTGGAGGCTCTCCAGCTTAAAGGTCTTCTTCATTCCCAAAAACCAAACCAATCTCCCATTGTTCTAATGAAACCTCTTAGATCTTCTTCTCGGTTCGACCAGTTCAATGGTCGAACTGGATATGATTCTCCTCCTCCGCATTCTTCAGTTCGGTCCAGTCCTCGAGCTCGTCGGAACTTAAGTCCTAGACTTTCCGGTGAGAATGATCGGGCTCAAGTTAATTCAAGAAACTCGAGCCCGACCAGGAGGAATGTCCCGAACGTGGAGACACGGAGGAGAGTTAGTAACGAAGGTATTGATTCGAGAAGAGTGTCTCCAGTTCATTCCCCTAAGATAAGTTCAAGAAGAAATGCAACGGCTCCGACAATGACAGGTGGATCTCCTAGAATGAGAAAAGTGATTGATCCTAAGGTGAAAATGTTGAATGTAGCAGAAGATGAATGGTCCACAGTTTCAGACAATAGCTTCACCACCTCTAATTCACATACAGATACAGAGAGATATAAACTGGATGAGTACAAAGAAGGGAGGAATCTGCTAGATAGATGTGATAAGTTGCTGAACAGTATAGCGGAAATAACATCAGCGAACGAGTTACAACCGAGTCCAGTATCCGTTCTTGACTCGTCCTTTTACAAAGACGAGTGGTGTTCACCTTCACCAATTACAAAACGATGCATTGATTACAATTTCAAAGATCAATCAGCGGAATCAGAAGATGAAATGTGGAGTGCCGGCGAAGGAAAATCCGACGAAGTAGAGGATTGTGATTTCGGTTATGTATCGGAGATTCTTCGTGCTTCTAGTTACTTTCCTGAAGACTGTGACATTTTCGGTTTACTTGAGAAGCAGCAATTTCTGAAGGGGAAAGATACATCAAAGGCTTCAACGATACAGAGGCGGTTAATTTTCGATACGTTACAGGAAATTCTTAACCGGAACAATCGGTTACCACCGTGGAAGGCAGTAGTTCAAGGAGATGAGACGCCGAAGATCTGGTCGGAGTTTCGGAGGATACGAGAGAGGGAAGAATCGGAATCGGAGTCGTCGGAGGATTTGTTTGGAGTGATATGTGGTGTGTTGAAGAAGGATATGGCGGAGGAGATAAGTGGTTGGGGTGAATGGACGGTGGAGATGGGAGATGTTGTTTTGGATATCGAACGGCTGGTATTCAAGGATTTAATTGGTGAAACTATACAACATCTTGCTTCATTTCTACCTCAATGTAACAAACTAGAAGCGCTTCGTAGAAAACTTGTATTTTAA 2181 0.4319 MTRTESIDIVTDQNLEKHIHKHMGCMAGFFQIFDRNHILSAKRIYSTKRLPPPSPKTPEKDGGSPVLSAPSPVKEIQQCEAKQNLPVLELKEGTRSSWKFSREAPRLSLDSRAVVDAKGALHPREIRTNTTVNLDNGGEKQRRSTSSVIVRLMGLDSLPTDSAAKLQRSASESRVSRDRFSESKIKANNYTQRSNVGLSQMNNHNHNHTNSNAVNVNANNVNFVNSYGTNDNRLWNGRGSEGGKGSLPMKQSKGTIMVQKKSFYDSTDFFPEPKHNVSIYGEIEKRLKMRGINQPSQDLDTLKHILEALQLKGLLHSQKPNQSPIVLMKPLRSSSRFDQFNGRTGYDSPPPHSSVRSSPRARRNLSPRLSGENDRAQVNSRNSSPTRRNVPNVETRRRVSNEGIDSRRVSPVHSPKISSRRNATAPTMTGGSPRMRKVIDPKVKMLNVAEDEWSTVSDNSFTTSNSHTDTERYKLDEYKEGRNLLDRCDKLLNSIAEITSANELQPSPVSVLDSSFYKDEWCSPSPITKRCIDYNFKDQSAESEDEMWSAGEGKSDEVEDCDFGYVSEILRASSYFPEDCDIFGLLEKQQFLKGKDTSKASTIQRRLIFDTLQEILNRNNRLPPWKAVVQGDETPKIWSEFRRIREREESESESSEDLFGVICGVLKKDMAEEISGWGEWTVEMGDVVLDIERLVFKDLIGETIQHLASFLPQCNKLEALRRKLVF* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2063 726 MobiDBLite consensus disorder prediction 341 390 - -
Tpr1g2063 726 Pfam Domain of unknown function (DUF4378) 562 702 IPR025486 -
Tpr1g2063 726 MobiDBLite consensus disorder prediction 412 429 - -
Tpr1g2063 726 MobiDBLite consensus disorder prediction 341 431 - -
Tpr1g2063 726 PANTHER OS11G0587300 PROTEIN 9 726 - -
Tpr1g2063 726 MobiDBLite consensus disorder prediction 162 182 - -
Tpr1g2063 726 PANTHER LONGIFOLIA PROTEIN 9 726 IPR033334 GO:0051513
Tpr1g2063 726 MobiDBLite consensus disorder prediction 46 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2063 Tpr-Chr1 21434794 21437959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2063 98 726 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 35.906 1.76e-90 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2063 - - mtr:MTR_1g071070 1136.32