Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1969 ATGGGTAACGTAGACTATGATTACCCTTGTTCGGGAATGAACAACGTTGATGAGAATCATGTGCAACGTGTGGAAATTCCACCTCCTCAACCATTTTTGAAATCTTTGAAGTATTCAATGAAAGAAACTTTCTTTCCAGATGATCCTTTGAGGAGGTTTAAGAATCAACCAGCTTCTAAAAAGTTTGTGCTTGGTCTTCAATATTTCTTCCCTATATTTGAATGGGCACCAAGTTACACTTTTCAGTTCTTGAAATCTGATCTCATAGCTGGCATCACTATTGCTAGTTTGGCTATTCCTCAAGGCATTAGCTATGCCAAACTTGCCAACCTCCCCCCAATTCTTGGACTATATTCGAGTTTTATACCACCTTTGATTTATGCTATGATGGGTAGTTCAAGGGATTTGGCAGTTGGAACAGTGGCAGTTGGATCTCTTTTGATGGGTTCCATGTTGGGAAATGTGGTTAATCCTAATGAAAACCCAAAGCTTTTTCTCCACCTTGCTTTCACAGCTACATTCTTTGCTGGGGTTTTGCAAGCTTCATTGGGTCTCTTTAGGTTAGGGTTTATAGTGGATTTCCTGTCACATGCAACTATAGTAGGATTCATGGGAGGAGCAGCCACGGTGGTGTGTCTGCAGCAGCTGAAATCGATACTAGGACTTGAACATTTCACCCATGCTGCTGATCTTGTATCAGTCATGCGCTCTGTTTTTACCCAAATTCATCACTGGAGGTGGGAAAGCGCAGTGTTGGGATTTTGCTTCATTTTCTTTCTCCTTGTCACAAGATACTTCAGCAAAAAACAACCAAAGTTCTTTTGGGTGTCAGCAATGACGCCGTTGGCATCCGTTATATTGGGAAGCTTGTTGGTTTATTTCACTCACGCAGAGAACCACGGCGTTCAAGTGATAGGAGAATTGAAAAAAGGACTAAATCCACCATCACTCACAGAATTGGTGTTTGTGTCACCATATATGACCACAGCTATCAAAACTGGACTTATTGTTGGCATTATTGCTCTTGCAGAAGGAATAGCTGTGGGAAGAAGCTTTGCAATGTATAAAAATTACAATATTGATGGAAACAAAGAGATGATAGCTATTGGAACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGTTCGGCAGTGAACTACAATGCTGGATGCAAGACTGCAGCATCCAACATTGTGATGTCAATTGCAGTCATGTTGACACTGTTATTTTTGACACCTTTGTTCTATTACACTCCTCTGGTGGTACTATCAGCCATAATTGTATCTGCAATGCTTGGACTTATAGATTATGAAGCAGCCATCCATCTGTGGAAGGTTGATAAATTTGATTTTGTCGTCTGCATTAGCGCATATATCGGTGTTGTTTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCGGTTGCTATATCAGTACTTCGGTTACTGCTGTTTATTGCAAGACCAAGAACATTTGTTTTGGGAAACATTCCAAACTCTATAATATACAGAAACATTGAGCATTATTCAAATGCAAATCGTGTTCCCGGAATCCTAATTTTAAAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCTCAAGGTGGATTGATGAAGAGGAAGACAGAATTAAATCTACAGGGGAAACAAGTTTGAAGTATATTATAATGGATATGAGTGCTGTTGGAAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGATTAAGAAGATAGCTGAAAGAAGAGAGCAACAACTTGTTTTGGTCAATCCTGGAAGTGAGGTGATGAAGAAACTAAATAAATCCAACTTCCAAAAGGACACAGGTGGAAATTGGATCTATCTTACAGTGCAAGAGGCTGTTAGAGCATGTAACTTTGTGCTCCATTCAAGCAAAACAAATCCCAAAAGAGATGAATCAGAGGGTTGGAACAATGTCTAA 1983 0.3979 MGNVDYDYPCSGMNNVDENHVQRVEIPPPQPFLKSLKYSMKETFFPDDPLRRFKNQPASKKFVLGLQYFFPIFEWAPSYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLGNVVNPNENPKLFLHLAFTATFFAGVLQASLGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHAADLVSVMRSVFTQIHHWRWESAVLGFCFIFFLLVTRYFSKKQPKFFWVSAMTPLASVILGSLLVYFTHAENHGVQVIGELKKGLNPPSLTELVFVSPYMTTAIKTGLIVGIIALAEGIAVGRSFAMYKNYNIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYEAAIHLWKVDKFDFVVCISAYIGVVFGSVEIGLVIAVAISVLRLLLFIARPRTFVLGNIPNSIIYRNIEHYSNANRVPGILILKIDAPIYFANASYLRERISRWIDEEEDRIKSTGETSLKYIIMDMSAVGNIDTSGISMLEEIKKIAERREQQLVLVNPGSEVMKKLNKSNFQKDTGGNWIYLTVQEAVRACNFVLHSSKTNPKRDESEGWNNV* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1969 660 Pfam Sulfate permease family 84 464 IPR011547 GO:0016021
Tpr1g1969 660 Gene3D STAS domain 495 640 IPR036513 -
Tpr1g1969 660 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Tpr1g1969 660 PANTHER SULFATE TRANSPORTER 2 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr1g1969 660 TIGRFAM sulP: sulfate permease 71 634 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr1g1969 660 Pfam STAS domain 516 634 IPR002645 -
Tpr1g1969 660 SUPERFAMILY SpoIIaa-like 521 638 IPR036513 -
Tpr1g1969 660 CDD STAS_SulP_like_sulfate_transporter 516 631 - -
Tpr1g1969 660 ProSiteProfiles STAS domain profile. 515 638 IPR002645 -
Tpr1g1969 660 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1969 Tpr-Chr1 19881639 19890187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1969 13 660 Inorganic Solute Cotransporters AT4G02700 68.721 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1969 K17471 - gmx:100810196 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1969 1 19881639 19890187 Tpr1g1969 1 19881639 19890187 ECH