Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1931 ATGACCATCTCAATGTCTATGTGTAGACTAATTAGACAACCTTTAATAAGCAATGTTCCATATAGTGGCCAAAAACTCAACATGAGACAAATTCAAAAGGAAAATGTAGTTTTGGTCATGGGAGCAACCGGGACAGGAAAGTCAAAGCTTTCAATTGACTTAGCAAATTATTTTCCATCAGAAATAATCAATTCAGACAAAATTCAAATCTATGAAGGTCTTGACATAGTAACAAACAAAATTTCAAAAGAAGAACAAAAAGGAATACCACACCATTTACTAGCAACACATAACCCCAACATAGAGTTCACATCCAACGATTTTCGTGAAATATCAACTTCGGCCATTGATTCAATCACGAGCCGCGAACATCTTCCGATCATTGTTGGCGGCTCGAATTCCTACCTTGAAGCCTTAGTTGATGATGACGACTATAATTTCCGATCGAGGTTCAATTTTTGTTGTCTTTGGGTCGATGTTTCATTACCAACTCTTCGTTCGTACATAGATCAACGCGTTGATCAAATGTTTAACACTGGAATGGTTAATGAGTTGCGACCCTTTTATAATCCGAACAGAGATTACTCAAAAGGGATACGAAAAGCCATTGGTGTTCCCGAATTCGATGAGTATTTTCGAAAGGAAAGTTTTGTGGATGACGAAACAAAGAAAATGTTGGTTGAAAAAGCTTTGAGTGAAATGAAGATGAATACATGGAAATTAGCTAGGAAACAACTTGCAAAAATTCATTGGCTTAAGAATGTTAAGAGATGGAATATTCATAGGTTAGATGCTACACCTGTTTTTAAGAAACATGGAAATGAAGCTGATGAAACATGGAAGAAGATTGTTGCAGAACCTAGTGCTATGATTGTGGCACAATATTTATATAACTCAAGAAATTCTTCTAATGTTGTGAATTCTTCTTCAAATCTTAGAGTGCCAATTTCTCAGAGTGATCTTATGGCTGCTGCAACATGTTAA 984 0.3598 MTISMSMCRLIRQPLISNVPYSGQKLNMRQIQKENVVLVMGATGTGKSKLSIDLANYFPSEIINSDKIQIYEGLDIVTNKISKEEQKGIPHHLLATHNPNIEFTSNDFREISTSAIDSITSREHLPIIVGGSNSYLEALVDDDDYNFRSRFNFCCLWVDVSLPTLRSYIDQRVDQMFNTGMVNELRPFYNPNRDYSKGIRKAIGVPEFDEYFRKESFVDDETKKMLVEKALSEMKMNTWKLARKQLAKIHWLKNVKRWNIHRLDATPVFKKHGNEADETWKKIVAEPSAMIVAQYLYNSRNSSNVVNSSSNLRVPISQSDLMAAATC* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1931 327 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 27 302 - -
Tpr1g1931 327 Pfam IPP transferase 148 247 - -
Tpr1g1931 327 Pfam IPP transferase 69 142 - -
Tpr1g1931 327 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Tpr1g1931 327 Gene3D - 33 296 IPR027417 -
Tpr1g1931 327 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 27 302 IPR039657 -
Tpr1g1931 327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 144 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1931 Tpr-Chr1 19394435 19396587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1931 149 303 C2H2 Transcription Factor Family AT2G27760 29.121 8.17e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1931 K10760 - gmx:100803964 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1931 1 19394435 19396587 Tpr1g1931 1 19394435 19396587 ECH