Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1903 ATGTTACTGCAATTTCTTTCAGTATTGCTTGGTGTCCTTACTATTTTGGTTTTGATACAAGCTCAAGATCAATCAGGATTTATTAGCTTAGATTGTGGTCTACCTGAAAATTCAACCTATTCTGAGAAGCTTACAGGCATAAATTACATATCTGATGCCAAATTCACAGATACTGGTGTAAGTATTAGGGTACAAGGCAATATTACCGGTAAACAGCAACTAGATTATGTGAGAAGCTTTCCTAATGGAGTGAAAAATTGTTACAGAATAAATGTAACAAATGGTAGTAAATATTTAATCAGAGCTTCTTTCTATTATGGTAACTATGATGATTTAAATGATCCACCACAATTTGATATTACTTTTGGAGCTAATGTTTGGGATACAGTGAAGTTCAACAATATATCACTTACCACAGTAAGGGAGATCATTTACACTCCATCAAAAGATTACATACAAACATGTCTTGTTAACACTGGCAAAGGGACTCCATTCATTTCAGCTATAGAATTGAGACCTTTGAACAAGCAAGCTTATGTTTCATACTCAGATAAATCAGTATTATCAATCTTCTTTCGATTTGATGTAGGCTCCATCACAAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCATTTGGCGACCTTTTCCGTGGAACGAGATGAAACAATTAAGCACCGATGATGATCTATTATTTCAGAACATTTATAATCCACCAACAATTGTTATGAGGACCGCAGTTACACCCGTAAATGACAGTGCCCCCGTAAAATTTAGTTTTGATGCAGAAAATGTAAATGAGCAATACTACGCATACTTGCACTTTAATGAGGTTGAGAAGCTGGCAGAAAATGAAACTAGAGCATTCAACATCACAGTGAATGGAGAGCTTTTGGCTGATCTTGAGGTACCTATATACCAGTCAGCAGATACCAGATATAGTACAACACCTTTGACTGGAGCCAGAAAATATATATTTACCCTGTCTAAGACTGAGAATTCAACCCTTCCACCCATTCTCAATGGCGTTGAGGTTTATAAAGTAACAAATTTCACACAATCTGAAACTCAACAGGATGATGTTGATACAATCACAAACATCAAGAATGCTTATGGGGTTGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTGTCAAGTATATATGGGAAGGCCTAAACTGTAGTACTGATGATGATGGCAATAACCCTCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGACAGGGGAGATAGCATCTTCCATATCAAACCTGACAATGTTACAATACTTGGATTTATCAAATAATAGCTTAGAAGGTCCTTTACCAGATTTTCTGACGCAACTGCAATCACTAAAAGTCTTAAACGTGGGGAAGAACAAACTTACAGGGTTGGTTTCAAATGAACTCTTTGAGAGATCAAAAACTGGTTCACTATCACTAAGTGTGGAAGATAACCCTGGTCTTTGTACACCAGAATCATGCAAAAAGAAGAAGAAGAATGTATCACTTATTGCATCATTTTCAGCATTAATTGTAATCCTCTTGATTTCACTTGTAGTTTTGAGATTTAGAAGACAAATAGGTAATTCTTGGAATACATATATACATGTTCATATTGAAGCTACATCTTCAAATTCTAAGAAAAAGGGTACCATGAAATCAAAACATCAAGCATTCAGTTATACTGAAATTCTCAATATTACTGATGACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCACTCTACAAGATCAAACTCGAGTCGCTGTTAAGAGGCTTTCACCATCATCAGTGCAAGGTTATAAGGAATTTGAATCAGAGGCACGACTTCTAACGATTGTTCATCATAGAAATTTGGTCTCCCTGATCGGATATTGCGATGAAGGTAACATCAAAGCATTAGTTTATGAATACATGGCCAATGGAAATCTCCAACAACGCTTATTAGTGAAAAATTCAAAAATCTTAAAATGGAATGAGAGACTTAACATCGCAGTTGATGCGTCACACGGACTGGATTATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAGCCTTCCAACATACTACTGGATGAAAACATGCATGCCAAGATTGCGGATTTTGGTCTAAGTAGAGCTTTTGGTAACGATAATGATTCTCATATAACCACACGTCTTGCTGGTACATTTGGTTACATTGATCCTGAATGTCAAAGAACAGGAAGCACAAATAAAACAAACGATATCTATAGCTTTGGAATAATTCTATTTGTGTTGATTACCGGTCGTCGAGCAATAGTAAGAACGGGCGAACAAAGCATTCACATACATGAATGGGTTACTTCTATAATTAGAGCAGGTGATATTCAAAATGTTGTTGATCCAAAGTTGAAGGGTGAATTCAACATCAATTCTGCATGGAAAATTGTTGAGATAGCAATGTTATGCACTTCAAGAAATGTTGCTGAAAGGCCAGACATTAGAAAAATATTGGCAGAGCTAAATGAATGTCTATCTTTGGAGGTGGGTCGTCAGAGAAATAATGGAAGTGAAAGATATATAGTTGAATCTATTTCTTTAAATGATCTAACACAAACAGCTCCCTTTGCTAGGTAA 2643 0.3594 MLLQFLSVLLGVLTILVLIQAQDQSGFISLDCGLPENSTYSEKLTGINYISDAKFTDTGVSIRVQGNITGKQQLDYVRSFPNGVKNCYRINVTNGSKYLIRASFYYGNYDDLNDPPQFDITFGANVWDTVKFNNISLTTVREIIYTPSKDYIQTCLVNTGKGTPFISAIELRPLNKQAYVSYSDKSVLSIFFRFDVGSITNLEYRYKDDVYDRIWRPFPWNEMKQLSTDDDLLFQNIYNPPTIVMRTAVTPVNDSAPVKFSFDAENVNEQYYAYLHFNEVEKLAENETRAFNITVNGELLADLEVPIYQSADTRYSTTPLTGARKYIFTLSKTENSTLPPILNGVEVYKVTNFTQSETQQDDVDTITNIKNAYGVARNWQGDPCGPVKYIWEGLNCSTDDDGNNPPRITSLNLSSSGLTGEIASSISNLTMLQYLDLSNNSLEGPLPDFLTQLQSLKVLNVGKNKLTGLVSNELFERSKTGSLSLSVEDNPGLCTPESCKKKKKNVSLIASFSALIVILLISLVVLRFRRQIGNSWNTYIHVHIEATSSNSKKKGTMKSKHQAFSYTEILNITDDFKTIIGEGGFGKVYFGTLQDQTRVAVKRLSPSSVQGYKEFESEARLLTIVHHRNLVSLIGYCDEGNIKALVYEYMANGNLQQRLLVKNSKILKWNERLNIAVDASHGLDYLHNGCKPPIMHRDLKPSNILLDENMHAKIADFGLSRAFGNDNDSHITTRLAGTFGYIDPECQRTGSTNKTNDIYSFGIILFVLITGRRAIVRTGEQSIHIHEWVTSIIRAGDIQNVVDPKLKGEFNINSAWKIVEIAMLCTSRNVAERPDIRKILAELNECLSLEVGRQRNNGSERYIVESISLNDLTQTAPFAR* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1903 880 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Tpr1g1903 880 Pfam Protein tyrosine and serine/threonine kinase 576 843 IPR001245 GO:0004672|GO:0006468
Tpr1g1903 880 Gene3D Phosphorylase Kinase; domain 1 545 649 - -
Tpr1g1903 880 Gene3D Transferase(Phosphotransferase) domain 1 650 866 - -
Tpr1g1903 880 PANTHER OS07G0107800 PROTEIN-RELATED 16 866 - -
Tpr1g1903 880 Gene3D Ribonuclease Inhibitor 363 487 IPR032675 -
Tpr1g1903 880 ProSiteProfiles Protein kinase domain profile. 574 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1903 880 SMART serkin_6 574 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1903 880 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 16 866 - -
Tpr1g1903 880 Pfam Leucine Rich Repeat 432 450 IPR001611 GO:0005515
Tpr1g1903 880 CDD STKc_IRAK 580 845 - -
Tpr1g1903 880 SUPERFAMILY L domain-like 367 486 - -
Tpr1g1903 880 Pfam Malectin-like domain 30 350 IPR024788 -
Tpr1g1903 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Tpr1g1903 880 SUPERFAMILY Protein kinase-like (PK-like) 559 844 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1903 Tpr-Chr1 19043134 19048660 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1903 12 850 Receptor kinase-like Gene Family AT1G05700 46.260 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr1g1903 Malectin_like 9.9e-104 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1903 - - mtr:MTR_8g014700 1192.56