Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g1903 | ATGTTACTGCAATTTCTTTCAGTATTGCTTGGTGTCCTTACTATTTTGGTTTTGATACAAGCTCAAGATCAATCAGGATTTATTAGCTTAGATTGTGGTCTACCTGAAAATTCAACCTATTCTGAGAAGCTTACAGGCATAAATTACATATCTGATGCCAAATTCACAGATACTGGTGTAAGTATTAGGGTACAAGGCAATATTACCGGTAAACAGCAACTAGATTATGTGAGAAGCTTTCCTAATGGAGTGAAAAATTGTTACAGAATAAATGTAACAAATGGTAGTAAATATTTAATCAGAGCTTCTTTCTATTATGGTAACTATGATGATTTAAATGATCCACCACAATTTGATATTACTTTTGGAGCTAATGTTTGGGATACAGTGAAGTTCAACAATATATCACTTACCACAGTAAGGGAGATCATTTACACTCCATCAAAAGATTACATACAAACATGTCTTGTTAACACTGGCAAAGGGACTCCATTCATTTCAGCTATAGAATTGAGACCTTTGAACAAGCAAGCTTATGTTTCATACTCAGATAAATCAGTATTATCAATCTTCTTTCGATTTGATGTAGGCTCCATCACAAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCATTTGGCGACCTTTTCCGTGGAACGAGATGAAACAATTAAGCACCGATGATGATCTATTATTTCAGAACATTTATAATCCACCAACAATTGTTATGAGGACCGCAGTTACACCCGTAAATGACAGTGCCCCCGTAAAATTTAGTTTTGATGCAGAAAATGTAAATGAGCAATACTACGCATACTTGCACTTTAATGAGGTTGAGAAGCTGGCAGAAAATGAAACTAGAGCATTCAACATCACAGTGAATGGAGAGCTTTTGGCTGATCTTGAGGTACCTATATACCAGTCAGCAGATACCAGATATAGTACAACACCTTTGACTGGAGCCAGAAAATATATATTTACCCTGTCTAAGACTGAGAATTCAACCCTTCCACCCATTCTCAATGGCGTTGAGGTTTATAAAGTAACAAATTTCACACAATCTGAAACTCAACAGGATGATGTTGATACAATCACAAACATCAAGAATGCTTATGGGGTTGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTGTCAAGTATATATGGGAAGGCCTAAACTGTAGTACTGATGATGATGGCAATAACCCTCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGACAGGGGAGATAGCATCTTCCATATCAAACCTGACAATGTTACAATACTTGGATTTATCAAATAATAGCTTAGAAGGTCCTTTACCAGATTTTCTGACGCAACTGCAATCACTAAAAGTCTTAAACGTGGGGAAGAACAAACTTACAGGGTTGGTTTCAAATGAACTCTTTGAGAGATCAAAAACTGGTTCACTATCACTAAGTGTGGAAGATAACCCTGGTCTTTGTACACCAGAATCATGCAAAAAGAAGAAGAAGAATGTATCACTTATTGCATCATTTTCAGCATTAATTGTAATCCTCTTGATTTCACTTGTAGTTTTGAGATTTAGAAGACAAATAGGTAATTCTTGGAATACATATATACATGTTCATATTGAAGCTACATCTTCAAATTCTAAGAAAAAGGGTACCATGAAATCAAAACATCAAGCATTCAGTTATACTGAAATTCTCAATATTACTGATGACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCACTCTACAAGATCAAACTCGAGTCGCTGTTAAGAGGCTTTCACCATCATCAGTGCAAGGTTATAAGGAATTTGAATCAGAGGCACGACTTCTAACGATTGTTCATCATAGAAATTTGGTCTCCCTGATCGGATATTGCGATGAAGGTAACATCAAAGCATTAGTTTATGAATACATGGCCAATGGAAATCTCCAACAACGCTTATTAGTGAAAAATTCAAAAATCTTAAAATGGAATGAGAGACTTAACATCGCAGTTGATGCGTCACACGGACTGGATTATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAGCCTTCCAACATACTACTGGATGAAAACATGCATGCCAAGATTGCGGATTTTGGTCTAAGTAGAGCTTTTGGTAACGATAATGATTCTCATATAACCACACGTCTTGCTGGTACATTTGGTTACATTGATCCTGAATGTCAAAGAACAGGAAGCACAAATAAAACAAACGATATCTATAGCTTTGGAATAATTCTATTTGTGTTGATTACCGGTCGTCGAGCAATAGTAAGAACGGGCGAACAAAGCATTCACATACATGAATGGGTTACTTCTATAATTAGAGCAGGTGATATTCAAAATGTTGTTGATCCAAAGTTGAAGGGTGAATTCAACATCAATTCTGCATGGAAAATTGTTGAGATAGCAATGTTATGCACTTCAAGAAATGTTGCTGAAAGGCCAGACATTAGAAAAATATTGGCAGAGCTAAATGAATGTCTATCTTTGGAGGTGGGTCGTCAGAGAAATAATGGAAGTGAAAGATATATAGTTGAATCTATTTCTTTAAATGATCTAACACAAACAGCTCCCTTTGCTAGGTAA | 2643 | 0.3594 | MLLQFLSVLLGVLTILVLIQAQDQSGFISLDCGLPENSTYSEKLTGINYISDAKFTDTGVSIRVQGNITGKQQLDYVRSFPNGVKNCYRINVTNGSKYLIRASFYYGNYDDLNDPPQFDITFGANVWDTVKFNNISLTTVREIIYTPSKDYIQTCLVNTGKGTPFISAIELRPLNKQAYVSYSDKSVLSIFFRFDVGSITNLEYRYKDDVYDRIWRPFPWNEMKQLSTDDDLLFQNIYNPPTIVMRTAVTPVNDSAPVKFSFDAENVNEQYYAYLHFNEVEKLAENETRAFNITVNGELLADLEVPIYQSADTRYSTTPLTGARKYIFTLSKTENSTLPPILNGVEVYKVTNFTQSETQQDDVDTITNIKNAYGVARNWQGDPCGPVKYIWEGLNCSTDDDGNNPPRITSLNLSSSGLTGEIASSISNLTMLQYLDLSNNSLEGPLPDFLTQLQSLKVLNVGKNKLTGLVSNELFERSKTGSLSLSVEDNPGLCTPESCKKKKKNVSLIASFSALIVILLISLVVLRFRRQIGNSWNTYIHVHIEATSSNSKKKGTMKSKHQAFSYTEILNITDDFKTIIGEGGFGKVYFGTLQDQTRVAVKRLSPSSVQGYKEFESEARLLTIVHHRNLVSLIGYCDEGNIKALVYEYMANGNLQQRLLVKNSKILKWNERLNIAVDASHGLDYLHNGCKPPIMHRDLKPSNILLDENMHAKIADFGLSRAFGNDNDSHITTRLAGTFGYIDPECQRTGSTNKTNDIYSFGIILFVLITGRRAIVRTGEQSIHIHEWVTSIIRAGDIQNVVDPKLKGEFNINSAWKIVEIAMLCTSRNVAERPDIRKILAELNECLSLEVGRQRNNGSERYIVESISLNDLTQTAPFAR* | 881 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g1903 | 880 | ProSitePatterns | Protein kinases ATP-binding region signature. | 580 | 602 | IPR017441 | GO:0005524 | |
Tpr1g1903 | 880 | Pfam | Protein tyrosine and serine/threonine kinase | 576 | 843 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g1903 | 880 | Gene3D | Phosphorylase Kinase; domain 1 | 545 | 649 | - | - | |
Tpr1g1903 | 880 | Gene3D | Transferase(Phosphotransferase) domain 1 | 650 | 866 | - | - | |
Tpr1g1903 | 880 | PANTHER | OS07G0107800 PROTEIN-RELATED | 16 | 866 | - | - | |
Tpr1g1903 | 880 | Gene3D | Ribonuclease Inhibitor | 363 | 487 | IPR032675 | - | |
Tpr1g1903 | 880 | ProSiteProfiles | Protein kinase domain profile. | 574 | 847 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g1903 | 880 | SMART | serkin_6 | 574 | 847 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g1903 | 880 | PANTHER | LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN | 16 | 866 | - | - | |
Tpr1g1903 | 880 | Pfam | Leucine Rich Repeat | 432 | 450 | IPR001611 | GO:0005515 | |
Tpr1g1903 | 880 | CDD | STKc_IRAK | 580 | 845 | - | - | |
Tpr1g1903 | 880 | SUPERFAMILY | L domain-like | 367 | 486 | - | - | |
Tpr1g1903 | 880 | Pfam | Malectin-like domain | 30 | 350 | IPR024788 | - | |
Tpr1g1903 | 880 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 694 | 706 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g1903 | 880 | SUPERFAMILY | Protein kinase-like (PK-like) | 559 | 844 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g1903 | Tpr-Chr1 | 19043134 | 19048660 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g1903 | 12 | 850 | Receptor kinase-like Gene Family | AT1G05700 | 46.260 | 0.0 | 751 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Tpr1g1903 | Malectin_like | 9.9e-104 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g1903 | - | - | mtr:MTR_8g014700 | 1192.56 |