Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1888 ATGGGGAAATACATCAAGAAAGCTAAACCTAAATCTGAATTAGCTTTGGTTGATTCCACCACCAAAATCACCACTACCGCCACCACAACAACCACCACTTACTTTGGTGTTCGAACTCGTGCAAAAATCCTAGCTCTTCAAAAATCAAATACACAGAATCATGACATTCCTCTTTCTGCTGATTCTTATCTCCAGCTTCGAAGTCGTCGACTTAAGAAAACCCGAATTGCTCAACATTCCAATAAGAAGAAAAATAAGTCCCAAATTCAAAACCCTAAATCACCAAATGGTAATTGTGGTAGTGAGGAGAAACATGTTCAGCAGAGTCCTAATATTGAAGATGTTTCCTTTGGGGAAAATGTTTTGGATTTTGAAGGTAGAGAGAGGTACAACTTTGATCCTATGACAAAGACACCACTCCCTGGGCGTTACGAATGGGAAAAATTGACACCTTGA 456 0.3947 MGKYIKKAKPKSELALVDSTTKITTTATTTTTTYFGVRTRAKILALQKSNTQNHDIPLSADSYLQLRSRRLKKTRIAQHSNKKKNKSQIQNPKSPNGNCGSEEKHVQQSPNIEDVSFGENVLDFEGRERYNFDPMTKTPLPGRYEWEKLTP* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1888 151 PIRSF CKI_KRP_plant 126 151 IPR044275 GO:0004861|GO:0045736|GO:0051726
Tpr1g1888 151 PIRSF CKI_KRP_plant 1 129 IPR044275 GO:0004861|GO:0045736|GO:0051726
Tpr1g1888 151 Gene3D p27 120 151 IPR044898 -
Tpr1g1888 151 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 127 IPR044275 GO:0004861|GO:0045736|GO:0051726
Tpr1g1888 151 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 128 149 IPR044275 GO:0004861|GO:0045736|GO:0051726
Tpr1g1888 151 MobiDBLite consensus disorder prediction 83 115 - -
Tpr1g1888 151 MobiDBLite consensus disorder prediction 74 151 - -
Tpr1g1888 151 Pfam Cyclin-dependent kinase inhibitor 127 149 IPR003175 GO:0004861|GO:0005634|GO:0051726
Tpr1g1888 151 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4 1 127 - -
Tpr1g1888 151 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4 128 149 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1888 1 151 Core Cell Cycle Gene Families AT3G24810 28.641 1.50e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1888 - - gmx:100781000 114.775