Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1839 ATGGCGGGACAACTAGGAGTGCTTAATGCACTCGATGTGGCGAAGACACAAATGTACCATTTCACAGCAATTGTGATTGCTGGAATGGGTTTTTTCACTGATGCTTATGATCTCTTCTGCATTTCCCTTGTCACAAAATTGTTAGGAAGAATCTATTACACAGATTACACCAAACCAAAGCCAGGTGTTCTTCCTCCAAGTGTACAAGCCGCTGTAACTGGTGTCGCGCTATGCGGCACTTTAGCAGGCCAACTATTCTTCGGTTGGCTTGGTGACAAATTAGGAAGAAAGAAGGTTTATGGTATAACCCTTATGCTTATGGTAGGTTGTTCACTCGCCTCGGGTCTATCTTTTAGTAATAGTCCAAAGGGTGTTATGGCAACACTTTGTTTCTTTAGGTTTTGGCTTGGTTTTGGTATTGGTGGTGATTACCCTCTTTCAGCCACAATTATGTCTGAATATGCGAACAAAAAGACGCGAGGCGCTTTCATTGCCGCTGTGTTTGCTATGCAAGGATTTGGAATCATGGCTGGTGGAATAGTTGCATTGATTGTAGCTACTGCTTTTGATCACAAATATAAAGTTCCTAGTTACGAAGAAAACGCGCATGCGTCACTTGTGTTACCAGCTTTCGATTACGTTTGGCGTATTATTCTAATGTTTGGTGCTGTTCCAGCAGCACTTACCTATTACTGGCGTATGAAGATGCCGGAGACGGCTCGTTACACCGCACTTGTTGCTAAGAATGCTAAACAAGCAGCTTCTGATATGTCTAAGGTGTTACAAGTTGATCTTGAAGTTCAAGAGGTTGTTGAGGATAAGACTCAAAAGTTTGGTCTTTTTACCAAGCAATTTGCAAAACGTCACGGTATGCACTTGTTAGGAACAACTACTACTTGGTTCTTGCTGGACATTGCTTTCTACAGTCAGAATCTTTTCCAAAAGGACATTTTCACCGCCATTGGATGGATCCCTCCGGCGAAAGAAATGAACGCAATCCACGAACTTTATAGGATTGCAAGAGCACAAACACTTATAGCAATGTGCAGTACTGTTCCAGGTTACTGGTTTACAGTGGCGTTTATCGATTACATGGGTCGATTCGCAATCCAATTGATGGGTTTCTTCTTCATGACGGTCTTCATGTTCGCTCTCGCTATACCTTACGATCACTGGACTAAAAAAGAAAACAGAATCGGATTTGTTGTGATGTACTCATTAACTTTCTTTTTTGCCAATTTTGGTCCAAACGCTACCACATTTGTTGTTCCAGCCGAGATTTTCCCTGCAAGGCTGAGATCCACCTGTCATGGAATTTCGGCTGCTGCAGGAAAAGCCGGAGCAATTGTTGGTGCATTTGGATTCTTATATGCTGCACAAAGTAAGGATCCAACTAAGACTGATGCAGGTTACCCAACCGGTATTGGTATTAAGAACTCGCTTATTATGCTTGGTGTTGTTAACTTCTTTGGAATGGTATTCACGTTCTTAGTACCGGAACCTAATGGTAAATCATTGGAAGAGATGAGTGGTGAGAATGAAGAAGATGATGCTGAGGCTATTGAGATGGCAGGGTCAGGAACTGCTAGGACAGTACCAGTTTAA 1605 0.4249 MAGQLGVLNALDVAKTQMYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDYTKPKPGVLPPSVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGITLMLMVGCSLASGLSFSNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIMAGGIVALIVATAFDHKYKVPSYEENAHASLVLPAFDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVDLEVQEVVEDKTQKFGLFTKQFAKRHGMHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKEMNAIHELYRIARAQTLIAMCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTDAGYPTGIGIKNSLIMLGVVNFFGMVFTFLVPEPNGKSLEEMSGENEEDDAEAIEMAGSGTARTVPV* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1839 534 CDD MFS_PhT 24 501 - -
Tpr1g1839 534 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 525 - -
Tpr1g1839 534 SUPERFAMILY MFS general substrate transporter 12 510 IPR036259 -
Tpr1g1839 534 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 525 - -
Tpr1g1839 534 Gene3D MFS general substrate transporter like domains 19 524 IPR036259 -
Tpr1g1839 534 TIGRFAM 2A0109: phosphate:H+ symporter 10 512 IPR004738 GO:0005315|GO:0006817|GO:0016021
Tpr1g1839 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 503 IPR020846 GO:0022857
Tpr1g1839 534 Pfam Sugar (and other) transporter 24 510 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1839 Tpr-Chr1 18166895 18170816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1839 4 516 Inorganic Solute Cotransporters AT5G43360 80.464 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1839 K08176 - gmx:100780201 918.302