Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1838 ATGGCTAACGAACAGTTGAAGGTGCTTAATGCACTTGATGTTGCCAAAACACAATTGTATCATTTCACAGCAATTGTGATTGCAGGAATGGGATTTTTCACTGATTCCTATGATCTCTTCTGCATTTCCCTTGTCACGAAATTACTCGGCCGTGTTTATTACTACGAAGGCGGTAAAAATCCAGGTTCTCTGCCACAAAATGTTTCTGCTGCAATCAATGGTGTTGCCTTCTGTGGAACACTAGCAGGACAACTTTTCTTTGGTTGGCTTGGTGACAAAATGGGAAGAAAACGTGTTTATGGAATGACCCTTATGCTCATGGTGATATCTTCACTTGCTTCTGGTCTATCTTTTAGTAAAGATCCCAAAACTGTTGTAGCTACTCTTTGTTTCTTCAGGTTTTGGCTTGGATTCGGAATTGGTGGCGATTACCCTCTTTCAGCTACAATTATGTCCGAGTATGCAAATAAAAAGACTCGTGGCGCTTTTATAGCGGCTGTTTTTGCTATGCAAGGTTTCGGAATTTTGTCTGCTGGCGCGGTTGCAATTATAGTTTCGTCTATTTTTAAAGCTTTGTATCCTGCACCGGCGTTTCAAGTTAATCCGGTTTTGTCCACGGTTTCACAAGCAGATTATGTTTGGAGGATAATCTTAATGTTCGGTGCAATTCCAGCATCGCTTACATACTATTGGAGGATCAAAATGCCCGAAACTGCGAGATACACTGCCTTGGTTGCCAAGAATACTAAACAAGCTACTGAAGATATGTCGAAAATTTTGCAAGTTGAGATTGAAGCTGAACAGGAAAATGTTCAGCAATTGGATCAAACACAAGGAGGGAATAATGAGAATGATTTTGGTTTGTTTACAAAAAGGTTTCTTCGCCGTCACGGACTTCATTTGCTTGGAACTGCCATCACTTGGTTCTTGTTAGATATTGCTTATTATAGTCAGAATCTTTTTCAGAAAGATATTTTTAGTGCAATTGGATGGATACCAGAAGCTAAAACCATGAGTGCCATTGAAGAGGTTTATAAAATTGCTAGAGCACAAACTCTAATAGCACTTTGCAGCACTGTTCCTGGTTATTGGTTCACGGTGGCGCTAATTGATAGAATCGGAAGGTTTACAATTCAGTTGATGGGATTTTTCTTCATGACTGTGTTCATGTTTGCATTGGCTATTCCATATCATCATTGGACAATGAATGGAAACCAAATTGGATTTGTTGTCATGTATTCCTTAACATTCTTCTTTGCAAATTTCGGTCCAAATGCAACGACTTTTGTGGTTCCAGCCGAGATTTTCCCGGCAAGGTTAAGGTCAACATGTCATGGAATATCAGCTGCTGCTGGAAAAGCTGGTGCAATGGTAGGTGCTTTTGGTTTCTTATATGCTCAAAATGCTATTGGAGTGAGAAATGTGCTTCTGCTTTTGGGTGTGGCTAATTTCTTGGGGATGATGTTTACATTCTTGGTGCCTGAAACTAAAGGAAAATCTTTGGAAGAGATTTCTGGTGAAGCTGATGAAAAAACAACTACTAATAGAGAATCTGCATTGGAGGCTGGTCTTCAAGTTTAG 1581 0.3985 MANEQLKVLNALDVAKTQLYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRVYYYEGGKNPGSLPQNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVISSLASGLSFSKDPKTVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILSAGAVAIIVSSIFKALYPAPAFQVNPVLSTVSQADYVWRIILMFGAIPASLTYYWRIKMPETARYTALVAKNTKQATEDMSKILQVEIEAEQENVQQLDQTQGGNNENDFGLFTKRFLRRHGLHLLGTAITWFLLDIAYYSQNLFQKDIFSAIGWIPEAKTMSAIEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFTIQLMGFFFMTVFMFALAIPYHHWTMNGNQIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNAIGVRNVLLLLGVANFLGMMFTFLVPETKGKSLEEISGEADEKTTTNRESALEAGLQV* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1838 526 Pfam Sugar (and other) transporter 25 505 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr1g1838 526 Gene3D MFS general substrate transporter like domains 281 522 IPR036259 -
Tpr1g1838 526 Gene3D MFS general substrate transporter like domains 20 264 IPR036259 -
Tpr1g1838 526 MobiDBLite consensus disorder prediction 503 526 - -
Tpr1g1838 526 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 517 - -
Tpr1g1838 526 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 4 517 - -
Tpr1g1838 526 SUPERFAMILY MFS general substrate transporter 12 505 IPR036259 -
Tpr1g1838 526 CDD MFS_PhT 25 497 - -
Tpr1g1838 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 498 IPR020846 GO:0022857
Tpr1g1838 526 Coils Coil 250 277 - -
Tpr1g1838 526 TIGRFAM 2A0109: phosphate:H+ symporter 11 507 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1838 Tpr-Chr1 18155331 18157028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1838 1 511 Inorganic Solute Cotransporters AT3G54700 75.810 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1838 K08176 - gmx:100802365 921.768