Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1790 ATGAGAATCAGACATCTTCATATCAAGCTCAAGGCATTTAGGTTGAAAAGGTTTCTGCTAAGATTTCTAAGCAGAAAAAGAAGGCTGATGCCAGCAAAAAAGCCTTCATGGATGACACCAGTAACACATGGTTATCAAGTGGTGGAACATCATATGATAAAAAATGGTTCTGATTACTCAGATATTGATTCAATTGTGGTACAAAGGGAGCAAATGGATCAAACTGAATTGTGGTATTTTGGAATATTTGATCCATTAGTTGGAGACAAGGTTACCAAGTACATGCAATCTCATTTCTTTACAAAGAAGCTTCAAGAGGCTCAAATATGGAGAAAAAGCAAAGAAATAATGAAGAGAGCTTATCTTGGTGTTAGGTCAAAGATGAAAGAAGAACAAAGATATGAAGACACATGTAGAATGAGTTCAGCATCTGTTATGGTAATCAATGGAGAAAAACTTGTAATAGCTAATATAGGAAATTACAGAGTTGTTGTGTGTAGAGATGGAATGGCTCATCAGAAAACTGATACATATCAACAATCAGTCAAACGACATTGGTCTCGCAGAATATTTTCAGCATATGAATCAGGAAATGAAGTGGCTACAACTACAAGACATTCTAGCAGCTCAGAACCTGTCATCAGGAGTGAAAGTATTGATTCTGATACTGAATTTTTGATATTAGCAAGTAATGGTATATGGGAGGTTATGAAGAATCAAGAAGCTGTGAATCTAATAAGTCATATAGAAGATCCACAAGAAGCAGCTGAATGTTTGGCAAATGAAGCTCTAAATAGGATGAGCAAAAGCAACATTTCATGCTTAATCATTCGCTTTGATTGA 843 0.3547 MRIRHLHIKLKAFRLKRFLLRFLSRKRRLMPAKKPSWMTPVTHGYQVVEHHMIKNGSDYSDIDSIVVQREQMDQTELWYFGIFDPLVGDKVTKYMQSHFFTKKLQEAQIWRKSKEIMKRAYLGVRSKMKEEQRYEDTCRMSSASVMVINGEKLVIANIGNYRVVVCRDGMAHQKTDTYQQSVKRHWSRRIFSAYESGNEVATTTRHSSSSEPVIRSESIDSDTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLANEALNRMSKSNISCLIIRFD* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1790 280 ProSiteProfiles PPM-type phosphatase domain profile. 59 279 IPR001932 -
Tpr1g1790 280 PANTHER ALPHABET, ISOFORM E-RELATED 6 279 - -
Tpr1g1790 280 SUPERFAMILY PP2C-like 63 280 IPR036457 -
Tpr1g1790 280 SMART PP2C_4 49 277 IPR001932 -
Tpr1g1790 280 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 279 - -
Tpr1g1790 280 Gene3D - 54 280 IPR036457 -
Tpr1g1790 280 CDD PP2Cc 63 279 IPR001932 -
Tpr1g1790 280 Pfam Protein phosphatase 2C 77 180 IPR001932 -
Tpr1g1790 280 Pfam Protein phosphatase 2C 204 272 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1790 Tpr-Chr1 17487094 17489561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1790 1 279 PP2C-type Phosphatase Gene Family AT3G23360 48.929 2.11e-84 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1790 K19704 - gmx:100785227 371.703