Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1783 ATGATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGGAAAATTGGGGGTGGTTCATTTGGAGAACTTTACTTGGCTGTTAATGTACAAACTGGAGAGGAAGTTGCTATCAAGCTAGAGCCTGTGAAGACCAAACATCCTCAACTTCACTACGAGTCAAAATTGTACCTGCTTCTTCAAGGGGGAACGGGTATTCCCCATTTAAAATGGTTTGGAGTTGAGGGTGACTATAATTGCATGGCAATTGACCTCCTTGGACCAAGTCTTGAAGACCTGTTTAACTATTGCAATAGGAAATTCTCTCTGAAAACAGTTCTGATGCTTGCCGATCAGCTACTAAACAGAGTTGAGTACATGCACTCCCGGGGTTTCCTGCACCGTGATATAAAGCCTGACAACTTTTTAATGGGATTAGGTCGCAAAGCAAATCAGGTATACATAATTGATTACGGCCTTGCAAAAAAGTATCGAGATCTTCACACACACAAGCATATACCATATAGGGAAAACAAGAACCTCACTGGAACTGCCCGGTATGCAAGTGTTAATACCCATCTGGGAGTTGAACAAAGCAGAAGAGATGACCTGGAATCACTTGGTTATGTGCTCATGTACTTTTTGAGAGGAAGCCTCCCTTGGCAAGGCTTGAAAGCTGGCAATAAAAAACAAAAATACGACAAGATAAGTGAAAAGAAGATGCTTACTCCTATAGAGGTTTTGTGCAAGTCACATCCATTGGAATTTACATCATTCTTCCACTATTGCCGATCTTTGCGGTTTGAGGATAAGCCTGATTATTCGTATCTTAAAAGACTCTTTCGTGACCTATTCATCCGAGAAGGCTATCAGTTTGACTATGTGTTTGATTGGACTATATTGAAATATCCACAAATTGGATCCAGCTCCAGATCCCGGCCAAGTGGAAAACCAGTCATAAATCCAGGACAATCAGGAGAGAGAATAATAGAACGGCCTTCAGGTGGACCAGAGATCCGGGATAGATTTTCAGGCGCAGTCGAGGCATTTGCAAGAAGGAATGGATCTGGGACTGGTCTTCACAGTGATAATTCCAGGCATAGGTCTTCGGACGATAGGCCATCTTCTAAAGACGTGCAAGCTGATTCTGAGAGGCCCCGTAGCTCTTCGCGTCATGGCAGTTCTTCAAAAAGACCTGTCTTATCAAGCAGCCGTCCTAACTCTTCCGGTGAACCGAGTGAAAGCCGGTCTAGCCGATTGCTCTTGAGCAGTAGCCGGCTATCTACTACTCAGAGGACTCAGCCAGGTCTCGAGTCCAAAACATCATCATTTAATCGTGTTTCTGGGACAAGAGGTGGTCGTGATGATACACTCCGGAGTTTTGAACTCCTGTCACTTGGCACAGGAAAAAGGAAATGA 1398 0.4392 MMDHVIGGKFKLGRKIGGGSFGELYLAVNVQTGEEVAIKLEPVKTKHPQLHYESKLYLLLQGGTGIPHLKWFGVEGDYNCMAIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLHTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDKISEKKMLTPIEVLCKSHPLEFTSFFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRSRPSGKPVINPGQSGERIIERPSGGPEIRDRFSGAVEAFARRNGSGTGLHSDNSRHRSSDDRPSSKDVQADSERPRSSSRHGSSSKRPVLSSSRPNSSGEPSESRSSRLLLSSSRLSTTQRTQPGLESKTSSFNRVSGTRGGRDDTLRSFELLSLGTGKRK* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1783 465 SUPERFAMILY Protein kinase-like (PK-like) 5 291 IPR011009 -
Tpr1g1783 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Tpr1g1783 465 MobiDBLite consensus disorder prediction 346 448 - -
Tpr1g1783 465 ProSiteProfiles Protein kinase domain profile. 10 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1783 465 PANTHER CASEIN KINASE I-LIKE PROTEIN 2 452 - -
Tpr1g1783 465 CDD STKc_CK1_delta_epsilon 9 283 - -
Tpr1g1783 465 Gene3D Transferase(Phosphotransferase) domain 1 1 320 - -
Tpr1g1783 465 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Tpr1g1783 465 SMART serkin_6 10 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1783 465 MobiDBLite consensus disorder prediction 300 331 - -
Tpr1g1783 465 Pfam Protein kinase domain 11 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1783 465 PANTHER CASEIN KINASE-RELATED 2 452 - -
Tpr1g1783 465 MobiDBLite consensus disorder prediction 357 384 - -
Tpr1g1783 465 MobiDBLite consensus disorder prediction 386 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1783 Tpr-Chr1 17356858 17364464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1783 9 214 MAP Kinase Kinase Kinase AT3G06030 25.926 6.04e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tpr1g1783 Pkinase 5.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1783 K08960 - jre:108991207 760.37