Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1764 ATGGCTAGAGATGGTAGTGTTGTACCTGCGGACCCACAGGCTATGGTAGTTGCGAAGAAGAAGACACAGAGTTCAAGAAGTTGGATTTTGTTTGATGCTATGGGCCAAGGGTCGATGCTTGATGCTGACAAGTATGCCATCATGCATAGGGTTCAAATTAATGCACGTGATCTTAGAATTCTTGATCCCTTGCTCTCTTACCCTTCTACTATTCTTGGTCGTGAGAAAGCTATTGTTCTTAACTTGGAGCATATCAAGGCAATTATCACTGCTGAAGAGGTGTTGCTGCGAGATCCAACAGATGAACACGTGGTTCCTGTTGTTGAGGAACTGCAGAGGCGATTGCCTAAACTGAGTGACATCCATCAACAACAAGGAGATGGTAAAGAGTATCTTGGTGGTCAACAGGATGCTGAAGCTGCTGAAGAAGATGAGTCACCGTTTGAGTTTCGTGCCTTGGAGGTGGCTTTAGAAGCCATTTGTAGTTATCTTGCTGCACGTACAACTGAGTTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACTTCCAAGATTAGTAGTCGTAATTTGGACAGAGTGCGTAAACTGAAGAGTGCAATGACAAGGCTGACAGCTCGGGTTCAAAAGGTCAGAGATGAGCTTGAACAGTTGCTGGATGACGATGATGACATGGCCGACCTATACTTATCGAGAAAGGCAGGTTCAGCATCACCAGTTAGTGGATCAGGTCCTGCAAATTGGTTTGCCGGCTCCCCAACCATAGGATCAAAGATATCCAGAGCAAGTAGAGCAAGCATTGCAACAGTTCGTTTTGATGAAAATGATGTGGAAGAGCTTGAAATGTTGCTTGAGGCTTATTTCATGCAAATTGATGGCACATTGAACAAATTAACCACCCTGCGAGAGTATATTGATGATACTGAAGATTACATTAACATTCAACTTGACAACCATCGTAATCAGCTTATTCAGTTGGAACTCTTTCTTAGCTCTGGAACTGTTTGCTTATCTGTGTACTCTCTGGTGACTGCTATTTTTGGCATGAACATCCCGTATACTTGGAATGACGACCATGGATACATGTTCAAATGGGTGGTTATTGTCTCGGGGGTATTTTCCGCTATTATGTTTATCATGATTACCTTCTACGCTCGCAAAAAGGGGTTGGTTGGATCATAA 1182 0.434 MARDGSVVPADPQAMVVAKKKTQSSRSWILFDAMGQGSMLDADKYAIMHRVQINARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDEHVVPVVEELQRRLPKLSDIHQQQGDGKEYLGGQQDAEAAEEDESPFEFRALEVALEAICSYLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSASPVSGSGPANWFAGSPTIGSKISRASRASIATVRFDENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSVYSLVTAIFGMNIPYTWNDDHGYMFKWVVIVSGVFSAIMFIMITFYARKKGLVGS* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1764 393 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 393 - -
Tpr1g1764 393 MobiDBLite consensus disorder prediction 118 144 - -
Tpr1g1764 393 CDD Mrs2_Mfm1p-like 28 390 IPR039204 -
Tpr1g1764 393 Gene3D Magnesium transport protein CorA, transmembrane region 106 323 - -
Tpr1g1764 393 Gene3D - 14 99 - -
Tpr1g1764 393 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 329 381 IPR045863 -
Tpr1g1764 393 Pfam CorA-like Mg2+ transporter protein 266 381 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Tpr1g1764 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 393 IPR039204 -
Tpr1g1764 393 Coils Coil 194 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1764 Tpr-Chr1 17097652 17104028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1764 1 366 MRS2 Gene Family AT5G64560 80.435 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1764 K16075 - gmx:100810239 650.203