Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1763 ATGACAGTTGAAAATGTTCCTTTAAGTCCATTGGTAACCAAAAAAAGGAAGAACTCTCAATCTTATTCAAAATCCAATGCAAAAAAGGCCAAAACAGCTTCAAAAAATATTAAGAAATATGTAAGGAAAGGAAAGAAGATTCAAGAAAAGCCGAAGCAGCTGCAAGAAAAACTACCTATGACTCCACAAGCACCAAAAGCTCCTGCTTCTGAACTTTCTATTGTAGAAGATGTTAAGAAAGATGTGAAACAACAAGGTGGAATAGAAATTTTGGATGAAGTTTCTACAATTCTATCTGCAAGAAGAGCAAAAATTGCAGCTAGAAAAAAGTTTATCAGAACTGAATTAGCTCCTACTGCTAAACCTGACAAGGTCATAGTTGATGAAAAGAAAGACGATAAGCGCCCCCAGCTTGAAACAGTCACTCCAAAAATCAGATTTAAGAATTCGTCAAAACCAGAATCATCAAGTCAGAAAATAGTGTTCAAGAATATTTCAAGGGACAATGCTGAATCATGTAAAGAAAAATCTGCAATGTGTGAGCCATTGAATTGGTTAGTGGAAACTACAAACAAAAACAAGTCTCCTAATAACTCTACAATGCAAGAAAATGGTGTCATACCAATGCTTGTGGATTCTAGTGACAATGACTCTCATCACGTGACTAAGTTTGAAGTTAAGAATCATTGTATTAACCACCAAACAGAAACAGAAGGTGATCAAAATGATCCAAAATCATCTTCCTTGAAGTTTAAGCTTAAAAGAGTGGAAGAAAAAAGAGTAAAATTTTTTGAGGACTTGAATCTTCCAGCACTACCTGAAAATGAAAGCAAGGAAGACTTTGGTTCATTCTGGTTCTCCTTAGTTGCTTCCAAAGAACAGGAACTTTATGCACTGCCACAAATATCTACTCCCTACTTAAGGGTCAAGGATGGCATTTTAACTGTTTCACATATCAAAAAGTACATTGTGAAGAAGCTTAATCTTCATAGTGAAGATGAGGTGGAGATCTTATTAGGAGATAAGCCAGTTTTAAGTTCAATGCAGATGCAAAACTTAATGGAGTTGTGGTTGGAAACAATGTCAAAGAATGAAAGAGTTGAAACATCTGTTGGAAGCTCAGCTGAGGATTTTGTTATGGTCCTTTCGTACCGTCGAAAGGCTTGA 1167 0.3582 MTVENVPLSPLVTKKRKNSQSYSKSNAKKAKTASKNIKKYVRKGKKIQEKPKQLQEKLPMTPQAPKAPASELSIVEDVKKDVKQQGGIEILDEVSTILSARRAKIAARKKFIRTELAPTAKPDKVIVDEKKDDKRPQLETVTPKIRFKNSSKPESSSQKIVFKNISRDNAESCKEKSAMCEPLNWLVETTNKNKSPNNSTMQENGVIPMLVDSSDNDSHHVTKFEVKNHCINHQTETEGDQNDPKSSSLKFKLKRVEEKRVKFFEDLNLPALPENESKEDFGSFWFSLVASKEQELYALPQISTPYLRVKDGILTVSHIKKYIVKKLNLHSEDEVEILLGDKPVLSSMQMQNLMELWLETMSKNERVETSVGSSAEDFVMVLSYRRKA* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1763 388 MobiDBLite consensus disorder prediction 1 72 - -
Tpr1g1763 388 MobiDBLite consensus disorder prediction 31 46 - -
Tpr1g1763 388 Gene3D - 244 385 - -
Tpr1g1763 388 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED 21 387 - -
Tpr1g1763 388 MobiDBLite consensus disorder prediction 1 30 - -
Tpr1g1763 388 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 21 387 IPR044807 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1763 Tpr-Chr1 17091611 17094355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1763 299 387 C3H Transcription Factor Family AT3G23060 49.438 2.89e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1763 K16277 - lja:Lj5g3v1204350.1 202.601