Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1755 ATGTCGAATCACCCTTCCGATACTCCCGCCGACGATTTCCTCGAACAAATTCTCGGCCTCCCGAATTTCACCTCCGCTGATGGTACTGACACTTCTTCCTTAGCTGCTCCGATGATGCTGCAGCTCAACTCCGGCGAAGCAGCCACTCATCTTGGCGCCGGAGGTGGATTTCATGCGCCGGTTTACCATTTGGGCCTGAGTTTGGACCAAGGCAAAGGAGGAGGGTTCTTGAAGCCCGATGATGCTTCCGGGAGTGGGAAGCATTTCCGGGAGGATGTTGTTGATACCAGACCTAAGAATACATTTGAATTATATATTGCTCCATTCTGA 330 0.5152 MSNHPSDTPADDFLEQILGLPNFTSADGTDTSSLAAPMMLQLNSGEAATHLGAGGGFHAPVYHLGLSLDQGKGGGFLKPDDASGSGKHFREDVVDTRPKNTFELYIAPF* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1755 109 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 105 - -
Tpr1g1755 109 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1755 Tpr-Chr1 16973484 16974315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1755 8 97 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 49.505 1.13e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1755 - - aip:107647796 138.658