Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1726 ATGGGATTTTGTTTTTCACTATTAGAGCTACTTCTTCTCTTTTTTCACATATTCTTCTTCATAAATCCAACATGGGTTTGTGGGAATATAGAGTTAAGAGCATTAATGGACATGAAAGCTAGCTTGGATCCAAAGAATCATTTTTTACCATCTTGGACTATCAATGGTGATCCATGTGGTGAATCTTTTGAAGGAGTAGCATGCAACGAAAAGGGTCAAGTTGTTAACATTTCTTTGCAAGGAAAAGGTTTATCAGGGAAACTTTCATCAGCCATTGCTGGACTTAAACATTTGACAGGACTTTACTTGCATTATAATTCTTTGAATGGTGAGATACCAAGGGATGTTTCGAATTTGACTCAACTTAGTGAGTTGTATTTGAATGTGAATCAATTTTATGGGGAAATTCCTTTTGAGATTGGAAGCATGGAGAATTTACAAGTTTTGCAGCTTTCTTATAATCAGTTGACAGGAAGAATACCTACCCAACTTGGTGCTTTCAAAAAGTTAACTGTTGTTGCTTTGAAATCAAACCAATTAACTGGTGCTATCCCTGCTAGTCTAGGTGATTTGAATATGTTGGTGAGACTAGATTTGAGCTCTAACAATCTCATTGGTTCCATTCCTACTAGCCTAGCTAGTGTTCCTTCATTGAAAGTTTTGGATGTTCACAACAATACACTTTCTGGGAATGTTCCTCCTGCTCTTAAGAGACTACATGATGGATTTTTATATGAACACAATATGGGGTTATGTGGAGTTGGGTTTACATCCTTGAAAACTTGCAATACAAGCAAAGATGGATCATCAACAAAATATATCCCAGAAACTGGAAATGTGAGTTTATCTTGTACTGGAAATCGATGCCGCCATTCATCGAAATTCAATCAAGCCAAATCAATTATTGTTGGCATATCTGTGGTTATGATTTTAGTGTTGGCAATTGGTATCTTAGCCTTCACAATACATCTGCGTCGAAGAAAACAATATCTTGAAAATTCTTTACATATCTCTGATAGTCGTCCAAGTACCGACAAAGCCAAGGGTATATACCGGAAAAATGAGTCTCCTTTGCCTTGCCTTGAGTACTCTACTAGATCTGACCCTTTGGTGGATTATAGAGATTTCGACGGGGATAGCCAATACAGGTTCCGTAGTTTCATGTTCAACTTGGAAGAAGTGGAGTTAGCCACTCAAAATTTTGCGGATTCGAAATTGTTAGGCAAGAGTGAATTTTGTGCAACATATAAAGGTGTTTTAAGAGATGGATCTATTGTTGCTGTTAAGAGAATTAGCAAAAATAGTTGCAAGTATGATGAAGAAGAGGTTATGAAGATATTGAATAGTTTGGCATCAATGAGGAATGATAATTTAGTAAGGTTGAGAGGATTTTGTTGTTCAAGGGAAAGAGATGAATGGTTTCTGATCTATGATTTTGTTCCTAATGGAAAATTGTCACGTTTCCTTGATTTGCAAGAAAGTGATGAAGAAGTACTTGAATGGTCAACTAGAGTTTCTATTGCAAAAGGAATTGCTAAAGGTATGGCATATTTGCATTCAAACAAAGCAAACAAACCCATCATTATTCACCATAACATCTCAAGTGACAAAATTCTAATAAATCAGAGGTACAATCCACTGTTGGATGATTATGGCCTGTACAAGCTTCTTACAAATGACATTGTCTTCTCTGCACTTAAAGCTAGTGCAACAAAGGGTTACATGGCGCCCGAGTACGCAACTACCAGTCGGTTTTCGGAGGCAAGTGATGTTTATGCTTTTGGAATGGTGCTTTTCCAAATCCTTTCTGGGAAGAAGGAGATAACTAGCTCAATAAGACTTGCTGCAGAGTCCTTCAATTTCAAGGAATTTATGGATCCGAATCTTAATGGAAGATTTTTTGAATGTGATGCAGCTAAATTGACAAAAATAGCTTTATTTTGCATGCATGAGTCTCCATTTGAGAGGCCATCTATGGAAGCAATTGTTAAAGAATTGAGCAATTGTACTAGTTGTCTTTGA 2022 0.3665 MGFCFSLLELLLLFFHIFFFINPTWVCGNIELRALMDMKASLDPKNHFLPSWTINGDPCGESFEGVACNEKGQVVNISLQGKGLSGKLSSAIAGLKHLTGLYLHYNSLNGEIPRDVSNLTQLSELYLNVNQFYGEIPFEIGSMENLQVLQLSYNQLTGRIPTQLGAFKKLTVVALKSNQLTGAIPASLGDLNMLVRLDLSSNNLIGSIPTSLASVPSLKVLDVHNNTLSGNVPPALKRLHDGFLYEHNMGLCGVGFTSLKTCNTSKDGSSTKYIPETGNVSLSCTGNRCRHSSKFNQAKSIIVGISVVMILVLAIGILAFTIHLRRRKQYLENSLHISDSRPSTDKAKGIYRKNESPLPCLEYSTRSDPLVDYRDFDGDSQYRFRSFMFNLEEVELATQNFADSKLLGKSEFCATYKGVLRDGSIVAVKRISKNSCKYDEEEVMKILNSLASMRNDNLVRLRGFCCSRERDEWFLIYDFVPNGKLSRFLDLQESDEEVLEWSTRVSIAKGIAKGMAYLHSNKANKPIIIHHNISSDKILINQRYNPLLDDYGLYKLLTNDIVFSALKASATKGYMAPEYATTSRFSEASDVYAFGMVLFQILSGKKEITSSIRLAAESFNFKEFMDPNLNGRFFECDAAKLTKIALFCMHESPFERPSMEAIVKELSNCTSCL* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1726 673 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Tpr1g1726 673 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Tpr1g1726 673 Gene3D Phosphorylase Kinase; domain 1 375 479 - -
Tpr1g1726 673 Gene3D Transferase(Phosphotransferase) domain 1 481 672 - -
Tpr1g1726 673 SUPERFAMILY Protein kinase-like (PK-like) 379 666 IPR011009 -
Tpr1g1726 673 Gene3D Ribonuclease Inhibitor 142 263 IPR032675 -
Tpr1g1726 673 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Tpr1g1726 673 Pfam Protein tyrosine and serine/threonine kinase 405 666 IPR001245 GO:0004672|GO:0006468
Tpr1g1726 673 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 671 - -
Tpr1g1726 673 ProSiteProfiles Protein kinase domain profile. 401 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1726 673 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 11 671 - -
Tpr1g1726 673 SUPERFAMILY L domain-like 27 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1726 Tpr-Chr1 16526287 16529762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1726 6 514 Miscellaneous Gene Families AT4G22730 50.564 1.45e-169 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Tpr1g1726 PK_Tyr_Ser-Thr 3.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1726 - - gmx:100775422 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4502 2 49598546 49602517 Tpr1g1726 1 16526287 16529762 PCT