Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1699 ATGATTATATCTATTTACGCCTTGAAAAGCGATATGATTAGAGTCGTTCAGCAATCTTTACTTGGTTCAATCTTGTCAAATATGCTTCTTGTTCTTGGTTGTGCATTCTTTACTGGTGGGATTGTCCACTACAAAAAAGTTCAGGTTTTCAATAAGGCAGCTGCTGTGGTTAATTCAGGGTTGCTCTTGATGGCTGTAATGGGAATATTATTTCCTGCTGTGCTTCACTTTACTCACTCAGAGGTTCATCTTGGGAAGTCCGTCTTATCTCTATCCAGATTTAGCAGCTGCATAATGCTAGTGGCCTATGCAAGCTACCTTTTCTTTCAACTTAGAAGTCAACAAAATTTTTATAGTCCAGTTGACGAGGAAGTAGATACATGTGAAAACTCTGACGAGGAGGAAGAACTTGAGTTAACTAAATGGGAAGCGATAATCTGGCTTGGTATTTTGACAGTATGGGTTTCTGTATTGTCTGGATACCTTGTGGATGCCATAGAGGGAGCATCTGAATCATTGAATATGTCAGTGGCTTTTATTAGTGTCATCTTGCTTCCAATAGTAGGAAATGCTGCAGAGCATGCAAGTGCTATCATGTTTGCCGTAAAGGACAAGCTAGATATCACAATTGGAGTTGCTATTGGATCATCAACCCAAATATCGATGTTTGTGATCCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGATATGGACTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGCTGGTAGTTGCATTTATGATGCAGGAAGGGACGTCAAACTATTTTAAAGGCTTGATGCTTATTCTATGCTATCTTATAGTTGCTGCCAGTTTTTTCGTACACGTAGACCCTAAGAGTGGTGATGACTAA 894 0.3971 MIISIYALKSDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYKKVQVFNKAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCIMLVAYASYLFFQLRSQQNFYSPVDEEVDTCENSDEEEELELTKWEAIIWLGILTVWVSVLSGYLVDAIEGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKDMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSGDD* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1699 297 Gene3D - 1 125 IPR044880 -
Tpr1g1699 297 Gene3D - 131 288 IPR044880 -
Tpr1g1699 297 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 1 294 - -
Tpr1g1699 297 TIGRFAM cax: calcium/proton exchanger 1 287 IPR004798 GO:0006816|GO:0015369
Tpr1g1699 297 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 294 IPR004713 GO:0006812|GO:0008324|GO:0016021
Tpr1g1699 297 Pfam Sodium/calcium exchanger protein 145 284 IPR004837 GO:0016021|GO:0055085
Tpr1g1699 297 Pfam Sodium/calcium exchanger protein 2 111 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1699 Tpr-Chr1 16256545 16264363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1699 1 292 Antiporters AT3G13320 77.816 1.07e-164 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1699 K07300 - gmx:100806000 524.242