Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1691 ATGTCAACAAGAAGATATGCTTTTGGAAGGTTGGATGAAGCAAACCATCCAGATTCCATAAGAGCAACAATAGCTGAATTCATCTCCACTTGCCTCTTTGTCTTTGCTGGAGAAGGCTCTGCCCTTGCTCTAAGGAAGATATACAAGGATGCAGGGGCATCAGCGGGTGAGCTAGTGGTACTTGCACTAGCTCATGCATTTTCACTATTTGCTGCTATATCTGCTAGCATGCATGTATCTGGTGGCCATGTTAACCCTGCAGTTACTTTTGGTGCTCTTCTTGGTGGTAGAATCACTGCCCTTAGAGCTGTCTACTATTGGGTTGCTCAACTTCTTGGTTCTGTAGTTGCTTCCCTTTTATTGAGGCTTGTCACTAATAACATGAGACCACAGGGCTTCAATGTGGCAATAGGAGTAGATGTAGGGCACGGCCTTATACTTGAGATAGTCATGACATTTGGTTTAATGTATGTTGTATATGCCACTGCCATTGATCCCAAAAGGGGTTCTATAGGCACAATTGCTCCCTTAGCAATTGCATTTGTTGTTGGTGCAAACGTCTTAGCTGGTGGGCCTTTTGATGGAGCATGCATGAATCCTGCTCGGGCTTTTGGGCCAGCTTTAGTGGGCTGGAGATGGCATTATCATTGGATCTTTTGGGTTGGCCCATTACTTGGAGCTGCAATTGCAGCACTTTTATATGAATATATTATTGTTCCAACTGATCCTCCTCATACGCATACTCATCCTCATCATCAACCTTTGGCTCCTGAAGATTATTAG 783 0.4419 MSTRRYAFGRLDEANHPDSIRATIAEFISTCLFVFAGEGSALALRKIYKDAGASAGELVVLALAHAFSLFAAISASMHVSGGHVNPAVTFGALLGGRITALRAVYYWVAQLLGSVVASLLLRLVTNNMRPQGFNVAIGVDVGHGLILEIVMTFGLMYVVYATAIDPKRGSIGTIAPLAIAFVVGANVLAGGPFDGACMNPARAFGPALVGWRWHYHWIFWVGPLLGAAIAALLYEYIIVPTDPPHTHTHPHHQPLAPEDY* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1691 260 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 260 - -
Tpr1g1691 260 SUPERFAMILY Aquaporin-like 14 246 IPR023271 -
Tpr1g1691 260 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g1691 260 Gene3D Glycerol uptake facilitator protein. 4 244 IPR023271 -
Tpr1g1691 260 TIGRFAM MIP: MIP family channel proteins 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g1691 260 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g1691 260 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Tpr1g1691 260 PANTHER AQUAPORIN-8 1 260 IPR034294 -
Tpr1g1691 260 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g1691 260 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g1691 260 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g1691 260 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g1691 260 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr1g1691 260 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1691 Tpr-Chr1 16158136 16159788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1691 4 260 Major Intrinsic Protein MIP AT1G73190 68.702 7.67e-125 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1691 K09873 - gmx:100814469 416.001