Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g1691 | ATGTCAACAAGAAGATATGCTTTTGGAAGGTTGGATGAAGCAAACCATCCAGATTCCATAAGAGCAACAATAGCTGAATTCATCTCCACTTGCCTCTTTGTCTTTGCTGGAGAAGGCTCTGCCCTTGCTCTAAGGAAGATATACAAGGATGCAGGGGCATCAGCGGGTGAGCTAGTGGTACTTGCACTAGCTCATGCATTTTCACTATTTGCTGCTATATCTGCTAGCATGCATGTATCTGGTGGCCATGTTAACCCTGCAGTTACTTTTGGTGCTCTTCTTGGTGGTAGAATCACTGCCCTTAGAGCTGTCTACTATTGGGTTGCTCAACTTCTTGGTTCTGTAGTTGCTTCCCTTTTATTGAGGCTTGTCACTAATAACATGAGACCACAGGGCTTCAATGTGGCAATAGGAGTAGATGTAGGGCACGGCCTTATACTTGAGATAGTCATGACATTTGGTTTAATGTATGTTGTATATGCCACTGCCATTGATCCCAAAAGGGGTTCTATAGGCACAATTGCTCCCTTAGCAATTGCATTTGTTGTTGGTGCAAACGTCTTAGCTGGTGGGCCTTTTGATGGAGCATGCATGAATCCTGCTCGGGCTTTTGGGCCAGCTTTAGTGGGCTGGAGATGGCATTATCATTGGATCTTTTGGGTTGGCCCATTACTTGGAGCTGCAATTGCAGCACTTTTATATGAATATATTATTGTTCCAACTGATCCTCCTCATACGCATACTCATCCTCATCATCAACCTTTGGCTCCTGAAGATTATTAG | 783 | 0.4419 | MSTRRYAFGRLDEANHPDSIRATIAEFISTCLFVFAGEGSALALRKIYKDAGASAGELVVLALAHAFSLFAAISASMHVSGGHVNPAVTFGALLGGRITALRAVYYWVAQLLGSVVASLLLRLVTNNMRPQGFNVAIGVDVGHGLILEIVMTFGLMYVVYATAIDPKRGSIGTIAPLAIAFVVGANVLAGGPFDGACMNPARAFGPALVGWRWHYHWIFWVGPLLGAAIAALLYEYIIVPTDPPHTHTHPHHQPLAPEDY* | 261 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g1691 | 260 | PANTHER | MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER | 1 | 260 | - | - | |
Tpr1g1691 | 260 | SUPERFAMILY | Aquaporin-like | 14 | 246 | IPR023271 | - | |
Tpr1g1691 | 260 | CDD | MIP | 21 | 237 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Tpr1g1691 | 260 | Gene3D | Glycerol uptake facilitator protein. | 4 | 244 | IPR023271 | - | |
Tpr1g1691 | 260 | TIGRFAM | MIP: MIP family channel proteins | 25 | 234 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Tpr1g1691 | 260 | Pfam | Major intrinsic protein | 14 | 234 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Tpr1g1691 | 260 | ProSitePatterns | MIP family signature. | 83 | 91 | IPR022357 | - | |
Tpr1g1691 | 260 | PANTHER | AQUAPORIN-8 | 1 | 260 | IPR034294 | - | |
Tpr1g1691 | 260 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Tpr1g1691 | 260 | PRINTS | Major intrinsic protein family signature | 65 | 89 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Tpr1g1691 | 260 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Tpr1g1691 | 260 | PRINTS | Major intrinsic protein family signature | 147 | 165 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Tpr1g1691 | 260 | PRINTS | Major intrinsic protein family signature | 180 | 202 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Tpr1g1691 | 260 | PRINTS | Major intrinsic protein family signature | 217 | 237 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g1691 | Tpr-Chr1 | 16158136 | 16159788 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g1691 | 4 | 260 | Major Intrinsic Protein MIP | AT1G73190 | 68.702 | 7.67e-125 | 354 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g1691 | K09873 | - | gmx:100814469 | 416.001 |