Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1681 ATGGAAATGGCAATGACAGTGCCTTTTAGTTTAAGGAATAAGCTTAAGACTCTTTGTGCTTATGGTGATGGTTGGTCTTATGCCATTTTTTGGCGTTTTCTTGAGAAGAATCCTCCTATGTTGTTGAATGTGGAAGAAGCATACTATGAAGAACAATTAGGAGAAGGGATTCAAAACATGATTCCACAAGTGCATTTTTTGGGTGAAGGAATTGTTGGTGAAGCTGCTTTCACAAAAAAGCACAATTGGTTGCATTCAGTTAGTTGTGAGGTTGATTCTGGATTGTATCAACAATTCTCCTCTGGTATAATAAAGACAATTGTGGTTATACCTGTCAAAGCGTGCGGAGTGGTACAGTTTGGATCCAGAAATACGATTTTGGAGACAAATGACTTTTTGGATCAAACACGAAGTTTACTCAAGGAGATAGACGATATCGGCATGATAGGCGACTCAGAAAATGACGTTTTTCCATTGGATTTTACAAATGATGATCTCGATGGATTGTTAGCTTCAATTTCCTCAGAAAATTCATGTGATTGGAATCTCAAATATTTGCACGATGAAAACCGTAACGATCTGAGAGAAGTTTTTCCTTCTTGTGAAGAAAGGATAACTTCACCAGAATTCGATTCCTCGTCACTTAGTGACCAATTGAAATGTACCATAAAAGCTTTTTTGGAGCCTAACTCTTCTATGGACAACTTGATTTCCCAAAATACCCCCCTTTTCGATGAAAATCTTTGTTTCGATTCATTGGAGCAACTATTTGCATCCGAAACAATAGCACAGGAAGTGTGCACTTCATTTGCTAGCAGCATAGTTCATGATTCATCGTTGACCTCATTGCAAAATTCAATGGATAATGTTGTGACAGAAGTTGATTTACCAGCAAGTTCTAGTACACTCAATGGAATCTCTAGTAGCTTAGAGCCGATCGATATGTCAGCAGAAATTTTGAAGTTCAGTTCTATGGATGATCTTTGTCAATGCTTTGCTCCTTCACAGAAAGCTACCAGTAGCTGCAGAACAATGATTCAATTGAATAATAACGTTTCTGAAAGGATAAAATTTATTCCTACTTGTTCTGATCTAGGCCTACCCGAGAAAGAAACATCGGTAGTAATACATAGTTCCGAGAATGATTTCTTGGATAACATGGAATTTAATTTAGGATGTGATCAAGGTAGTGAATGGTGGGTGAATTTACTTACACCACTGGTGAGTGCGGCTACTGATAATACCGGCTTTTCTGAATGCATATCAGAGTGGAATACTAGTACACCGACCGATAATACTCGGAAGAGGCTATTCTCAGAATTAGGAATTGAAGAGCTTTTGAGAGATGAAACAAATTACATCAATCCTTTTAATAGTTCTAGTTTTGAGAATGAGTTATCATCATCAAATAAGAAGCATATGGTGGAATTTTCACCTATGAATATAACTTCATCACATTTCGGAAACCTTGCCGGAGCTGAAACTAGAGCAAACTTGATTCATTCGGGTTCGGAATTGGACAAGTCCAATAGTGTTTTAACGATGAAAGATACATTCCCGAAATTACAAGTAGGGGTGTTGGTTAATGATCGAAATAGCATCAATATCGAGAGTGCTGTTCCGGTACACCCTAGAAGATCAGAAGAGCCTACGAAACCCACAAAGAAGAAGGCTAAGCCGGGGGAAAGTACTCGACCGCGACCAAAAGATCGGCAACAGATCCAAGACTGTATTAAAGAGTTGAGAGGAATCATCCCTCATGGCGGAAAGTGTAGCATTGATTCTTTGTTAGACCGAACGATCAGATACATGCTTTTCTTACGCGGCATCATTAAATATGCAGACATACTACAAGAGCCTAATGAGCCTAAGCTTATTGACCAAGAAAATGAAGTGATTCCAAAAGACAAAAACCATGGTGCTACATGGGCATTTGAAGTAGCAAACCAAACAATGGTTTGTCCGATTATAGTTGAAGACATGAATCCACCTGGCCAAATGCTTATAGAGATGCTTTGTGAGGATCAAGGTTTCTTCCTTGAAATAGTCGACATAATTCGAGGTTTTGGGCTGAATATTTTGAAAGCAAAGATGGATTTAAGGAAGAATAAGCTATGGGCGCGTTTTATAGTTGAGACAAATAGACATGTTACAAGGATAGATGTGTTTTGGTCACTTATCAATCTTCTACAACAACCGAACACTGCCGGAATTGATTCTTCTAATAAGCATGGCAATATTATTCCTTCCAACATTGCTTAA 2262 0.3833 MEMAMTVPFSLRNKLKTLCAYGDGWSYAIFWRFLEKNPPMLLNVEEAYYEEQLGEGIQNMIPQVHFLGEGIVGEAAFTKKHNWLHSVSCEVDSGLYQQFSSGIIKTIVVIPVKACGVVQFGSRNTILETNDFLDQTRSLLKEIDDIGMIGDSENDVFPLDFTNDDLDGLLASISSENSCDWNLKYLHDENRNDLREVFPSCEERITSPEFDSSSLSDQLKCTIKAFLEPNSSMDNLISQNTPLFDENLCFDSLEQLFASETIAQEVCTSFASSIVHDSSLTSLQNSMDNVVTEVDLPASSSTLNGISSSLEPIDMSAEILKFSSMDDLCQCFAPSQKATSSCRTMIQLNNNVSERIKFIPTCSDLGLPEKETSVVIHSSENDFLDNMEFNLGCDQGSEWWVNLLTPLVSAATDNTGFSECISEWNTSTPTDNTRKRLFSELGIEELLRDETNYINPFNSSSFENELSSSNKKHMVEFSPMNITSSHFGNLAGAETRANLIHSGSELDKSNSVLTMKDTFPKLQVGVLVNDRNSINIESAVPVHPRRSEEPTKPTKKKAKPGESTRPRPKDRQQIQDCIKELRGIIPHGGKCSIDSLLDRTIRYMLFLRGIIKYADILQEPNEPKLIDQENEVIPKDKNHGATWAFEVANQTMVCPIIVEDMNPPGQMLIEMLCEDQGFFLEIVDIIRGFGLNILKAKMDLRKNKLWARFIVETNRHVTRIDVFWSLINLLQQPNTAGIDSSNKHGNIIPSNIA* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1681 753 MobiDBLite consensus disorder prediction 537 573 - -
Tpr1g1681 753 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 558 607 IPR011598 GO:0046983
Tpr1g1681 753 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 9 751 - -
Tpr1g1681 753 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 571 613 IPR036638 GO:0046983
Tpr1g1681 753 MobiDBLite consensus disorder prediction 542 573 - -
Tpr1g1681 753 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 60 139 IPR025610 -
Tpr1g1681 753 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 9 751 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1681 Tpr-Chr1 15999894 16004272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1681 549 740 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.608 2.08e-62 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1681 - - cam:101509177 999.193