Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1672 ATGGCCAGTCATAACAAGAACTGGTTCTTGGTTTCTCTCTTGCTCATTATATTGCTTCAAATCCAAACCAAAGTGTTCTGTTTTCAATACCAAGTTGGAGATCTAAATGCTTGGGGTATACCTACCTCAACAAATTCACAAGTCTATACCAAATGGTCCAAATTTCACAACTTCACCCTTGGAGACTCACTTTTGTTTCTATATCCACCAAGTCAAGATTCATTGATTCAAGTAACACAAGAATCATACAAGAGTTGCAATATTAAAGATCCAATATTGTTTATGAACAATGGTAACTCTTTGTTTAACATAACATCAAAAGGTGATTTTTATTTCACAAGTGGAGTAAATGGTCATTGCCAAAAGCATCAAAAGATTCATATATCTGTTGGAGGAATTGGAAATGTTGATGATGATGCTAATAGTCCAAGTTCATTGCCTGCAAATGGACCCTCTTATCAAAATGCATTTGGAAGCATTCCAGTAGCTCCTTCTACATCAAATTCACATCATTTAACTTCAACTTTTCATGTTCTTATTGTTGGATCTATCATATATGCAATGTTCTTTGCTTTAATGTAA 582 0.3402 MASHNKNWFLVSLLLIILLQIQTKVFCFQYQVGDLNAWGIPTSTNSQVYTKWSKFHNFTLGDSLLFLYPPSQDSLIQVTQESYKSCNIKDPILFMNNGNSLFNITSKGDFYFTSGVNGHCQKHQKIHISVGGIGNVDDDANSPSSLPANGPSYQNAFGSIPVAPSTSNSHHLTSTFHVLIVGSIIYAMFFALM* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1672 193 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Tpr1g1672 193 Gene3D - 28 141 IPR008972 -
Tpr1g1672 193 PANTHER BLUE COPPER PROTEIN 7 186 IPR039391 GO:0009055
Tpr1g1672 193 PANTHER MAVICYANIN 7 186 - -
Tpr1g1672 193 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Tpr1g1672 193 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1672 Tpr-Chr1 15905358 15906177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1672 3 162 Phytocyanin Superfamily AT1G64640 58.385 4.61e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1672 - - gmx:100527517 267.314