Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1671 ATGGGTTCGGGAAGCAGAAACTACTCTGCAAATCCGAACGATTACAGGCTTCTAGAAGAAGTCGGTTACGGTGCAAGCGCAACGGTTTATCATGCAATCTACATCCCTTACAACGAAGAAGTTGCAGTGAAATCTCTCGATCTAGATCGATGCAATTCAAATTTCGATGATATACGAAAAGAAGCACAGATCATGAGCTTAATTGATCATCGTAACGTTGTTAAATCGTATTGTTCATTCGTTGTGGATCGTAAACTTTGGGTGATTATGCCTTTTATGGCTCAAGGTTCTTGTTTGCATCTAATGAAAACTGCTTATCCTGATGGATTTGAAGAAGATGCTATTGGATCGATTCTCAAAGAAACTCTTAAAGCTTTGGATTATTTACATCAACATGGTCACATTCATCGTGATGTTAAAGCTGGTAATATTTTGCTTGATTCTAATGGTGAAGTCAAACTATCTGACTTTGGTGTTTCTGCTTCTATGTTTGATACTGGTGATCGTCAGCGTTCTAGAAATACTTTTGTTGGTACTCCTTGCTGGATGGCGCCGGAGGTGCTGCAACCTGGTACTGGTTATAATTTCAAGGCTGATATTTGGTCTTTTGGAATTACTGCACTTGAGTTGGCTCATGGTCATGCGCCGTTTTCTAAGTATCCTCCAATGAAGGTTTTACTCATGACCATACAAAATGCACCTCCTGGCCTTGATTACGATCGTGATAGAAAGTTCTCGAAGTCTTTTAAAGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCGTCTGTGGACAAGTTACTGAAACACCCCTTCTTCAAACAAGCTAAGCCTCCAGAACTTTCTGTGAAGAAATTATTTGCTGACTTACCACCTCTTTGGACTCGTGTAAAAGCCCTGCAGCTTAAAGATGCAGCTCAACTAGCACTGAAGAGAATGCCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATATAAGCGAGGAGTTAGTGCGTGGAACTTTGACGTTGATGATTTGAAAGCTCAAGCTTCATTGGTGCAGGAAAATGATGATATTGCAGAGATAAAGGAAGAAGAGGAAAACAAGTTCTTCATTTCCAGCAAGGATACAAGTACTTCCCAGCTTAATGTGGAGAAGAGGAATTCAGATAACTCCCAACAAGATGACTTCACGTTACAAGTAGGTGACAATGACGTACCACAGAGTGATAAAGTAAATGGATCAATTGCTGAGGCAACAACATCTACTTCAGAGAAGGACGTGGGAACAAGCAAGATTAAAACTCAGCCAGTCAAATTTGGTAAAACCCAAAGCGGGCCGCTGGTGCCTGGCACAGTGCTTGGTCATTATTTACCCGAAAGAGGGCGTCTATTTGAAAGGTTTGAGAATGAAAATCAGTTATCAGGTGAGAAAAGTAATCGGGATATGCGACGAGCTCCAAGCTTTAGTGGTCCATTGATGCTTCCAAATCGAGCTTCAGCAAACAGTTTGTCGGCCCCAATAAAATCCTCTGGAGGATTCAGAGATTCCTCAGATGATAAATCTAAGGCTAATCTAGTGCAAATTAAAGGGCGGTTCTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCTGTTTCACGCCGATCTCCACAGGCTCCACAGGATTCTTCACCACTGAGGAAATCTGCCAGTGTTGGTGATTGGATGTTGGATTTCAAACAACAAATGCCAATTGGACAATCTTCCAATGATCTTGCAAGCATGAATATTCCTACATCAGTTATTGTGCCTCACCTTCACAATCTTTTCCAACAGACATCTATTCAACAGGATCTTATAATGAGTCTGTTGAGTAGCTTGCAAATTACTGAGGCAAATGATGCTCTTCAGAATGGAAAGATGCCACCAATACCTCGCAGTCCAGAGAATAATGGCACTGTTGATACTACAGCTTCAGAGAGAGAACTACATTTGCTGTCCAAAATTTCAGAACTTCAGTCTCGGATGATCAGTTTGACAGATGAACTTACTTCTGAGAAGTTGAAACACATGCAGTTGCAACAACAAGTAGCCGCTCACTACAGCCAGCAACAAAACGGGGAAAGAGAGGAAGGTGCATGA 2130 0.4141 MGSGSRNYSANPNDYRLLEEVGYGASATVYHAIYIPYNEEVAVKSLDLDRCNSNFDDIRKEAQIMSLIDHRNVVKSYCSFVVDRKLWVIMPFMAQGSCLHLMKTAYPDGFEEDAIGSILKETLKALDYLHQHGHIHRDVKAGNILLDSNGEVKLSDFGVSASMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVDKLLKHPFFKQAKPPELSVKKLFADLPPLWTRVKALQLKDAAQLALKRMPSAEQEAISQSEYKRGVSAWNFDVDDLKAQASLVQENDDIAEIKEEEENKFFISSKDTSTSQLNVEKRNSDNSQQDDFTLQVGDNDVPQSDKVNGSIAEATTSTSEKDVGTSKIKTQPVKFGKTQSGPLVPGTVLGHYLPERGRLFERFENENQLSGEKSNRDMRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSSDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSPQAPQDSSPLRKSASVGDWMLDFKQQMPIGQSSNDLASMNIPTSVIVPHLHNLFQQTSIQQDLIMSLLSSLQITEANDALQNGKMPPIPRSPENNGTVDTTASERELHLLSKISELQSRMISLTDELTSEKLKHMQLQQQVAAHYSQQQNGEREEGA* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1671 709 CDD STKc_OSR1_SPAK 13 276 - -
Tpr1g1671 709 MobiDBLite consensus disorder prediction 547 564 - -
Tpr1g1671 709 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1671 709 SUPERFAMILY Protein kinase-like (PK-like) 12 327 IPR011009 -
Tpr1g1671 709 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 702 - -
Tpr1g1671 709 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1671 709 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Tpr1g1671 709 MobiDBLite consensus disorder prediction 546 565 - -
Tpr1g1671 709 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Tpr1g1671 709 MobiDBLite consensus disorder prediction 467 495 - -
Tpr1g1671 709 Gene3D Transferase(Phosphotransferase) domain 1 96 324 - -
Tpr1g1671 709 MobiDBLite consensus disorder prediction 467 481 - -
Tpr1g1671 709 MobiDBLite consensus disorder prediction 377 429 - -
Tpr1g1671 709 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1671 709 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 702 - -
Tpr1g1671 709 MobiDBLite consensus disorder prediction 690 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1671 Tpr-Chr1 15893638 15902533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1671 8 701 MAP Kinase Kinase Kinase Kinase AT4G10730 64.723 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Tpr1g1671 Pkinase 4.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1671 - - gmx:100783699 1135.55